Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Mup-ps10-201ENSMUST00000119626 556 ntBASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm13460-201ENSMUST00000121274 353 ntBASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm12885-201ENSMUST00000122246 328 ntBASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Mirt2-201ENSMUST00000175179 285 ntBASIC8.4□□□□□ -1.06
Usp40Q8BWR4 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC8.4□□□□□ -1.06
Usp40Q8BWR4 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm7443-201ENSMUST00000206355 378 ntBASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 AC122305.2-201ENSMUST00000215148 834 ntBASIC8.4□□□□□ -1.06
Usp40Q8BWR4 AC140409.4-201ENSMUST00000215757 538 ntBASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 AC154767.2-201ENSMUST00000224584 414 ntBASIC8.4□□□□□ -1.06
Usp40Q8BWR4 AC165092.4-201ENSMUST00000225025 679 ntBASIC8.4□□□□□ -1.06
Usp40Q8BWR4 AC154594.1-201ENSMUST00000225171 1273 ntBASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm8412-201ENSMUST00000077493 440 ntBASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Usp40Q8BWR4 Gm43031-201ENSMUST00000198500 1887 ntBASIC8.4□□□□□ -1.07
Usp40Q8BWR4 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Usp40Q8BWR4 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
Usp40Q8BWR4 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Usp40Q8BWR4 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Usp40Q8BWR4 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
Usp40Q8BWR4 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.07
Usp40Q8BWR4 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Gm7108-201ENSMUST00000118038 3407 ntBASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Gm18880-201ENSMUST00000223333 1541 ntBASIC8.39□□□□□ -1.07
Usp40Q8BWR4 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Dcdc5-202ENSMUST00000122388 4957 ntBASIC8.39□□□□□ -1.07
Usp40Q8BWR4 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Gm5512-201ENSMUST00000218013 1353 ntBASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Gm20768-201ENSMUST00000199527 2338 ntBASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Mir466j-201ENSMUST00000116876 122 ntBASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Gm11278-201ENSMUST00000121002 997 ntBASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Gm25782-201ENSMUST00000122526 289 ntBASIC8.39□□□□□ -1.07
Usp40Q8BWR4 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 AC164302.1-201ENSMUST00000227036 433 ntBASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Mir375-201ENSMUST00000083682 64 ntBASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Usp40Q8BWR4 Gm42549-201ENSMUST00000202392 7004 ntBASIC8.39□□□□□ -1.07
Usp40Q8BWR4 AC131068.3-201ENSMUST00000228438 1456 ntBASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Usp40Q8BWR4 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 94.7 ms