Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 AC118230.1-201ENSMUST00000220196 656 ntBASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 AC154527.1-201ENSMUST00000225809 242 ntBASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 AC129537.1-201ENSMUST00000226596 1228 ntBASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 n-R5s180-201ENSMUST00000082770 106 ntBASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Mir194-1-201ENSMUST00000083647 67 ntBASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Gm38248-201ENSMUST00000193744 5783 ntBASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Gm37370-201ENSMUST00000191996 1410 ntBASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Gm42685-201ENSMUST00000200378 2390 ntBASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Gm37137-201ENSMUST00000195138 2684 ntBASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Gm25346-201ENSMUST00000104509 128 ntBASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Gm7494-201ENSMUST00000121248 441 ntBASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Gm12929-201ENSMUST00000122406 370 ntBASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 n-R5s30-201ENSMUST00000122624 122 ntBASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Gm23553-201ENSMUST00000157817 295 ntBASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 AC117240.1-201ENSMUST00000199436 61 ntBASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Gm45448-201ENSMUST00000211739 209 ntBASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 AC131187.2-201ENSMUST00000223936 994 ntBASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 AC121870.1-201ENSMUST00000216279 4879 ntBASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Gm37930-201ENSMUST00000194308 1886 ntBASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Gm12057-201ENSMUST00000117244 1427 ntBASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ccdc40Q8BI79 Pramel-201ENSMUST00000118979 1383 ntBASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Gm45311-201ENSMUST00000211086 1330 ntBASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Gm11970-201ENSMUST00000116105 320 ntBASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Gm14382-201ENSMUST00000117374 437 ntBASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Gm15181-201ENSMUST00000120142 177 ntBASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Gm12369-201ENSMUST00000121343 942 ntBASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Gm15164-201ENSMUST00000122203 271 ntBASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Gm23954-201ENSMUST00000157213 353 ntBASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Mir1953-201ENSMUST00000157866 89 ntBASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Gm22116-201ENSMUST00000158791 141 ntBASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Mir7685-201ENSMUST00000183555 62 ntBASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Gm29464-201ENSMUST00000187692 513 ntBASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Gm42708-201ENSMUST00000196332 905 ntBASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Gm42983-201ENSMUST00000199879 815 ntBASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 BC049739-201ENSMUST00000202626 660 ntBASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Gm44539-201ENSMUST00000206010 238 ntBASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Gm30646-201ENSMUST00000207662 180 ntBASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Gm44809-201ENSMUST00000208305 993 ntBASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 AC148328.2-201ENSMUST00000216960 262 ntBASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Gm3785-201ENSMUST00000221000 202 ntBASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Gm18620-201ENSMUST00000222295 324 ntBASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Gm37504-201ENSMUST00000192537 2374 ntBASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Gm38137-201ENSMUST00000193735 1401 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms