Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Scaf4Q6PFF0 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Scaf4Q6PFF0 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Scaf4Q6PFF0 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Mir582-201ENSMUST00000103758 81 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm23437-201ENSMUST00000104036 127 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm26016-201ENSMUST00000104403 129 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm15233-201ENSMUST00000118747 400 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm12994-201ENSMUST00000119601 447 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm11259-201ENSMUST00000120554 715 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm15038-201ENSMUST00000122144 296 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm12317-201ENSMUST00000122307 319 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Mir1930-201ENSMUST00000158799 84 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm7393-201ENSMUST00000172650 739 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm23145-201ENSMUST00000178912 79 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm26738-201ENSMUST00000181312 601 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm29413-201ENSMUST00000186019 880 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm6610-201ENSMUST00000186324 358 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm28597-201ENSMUST00000187664 666 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm6472-202ENSMUST00000187973 582 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm29639-201ENSMUST00000188375 580 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm28337-201ENSMUST00000190425 666 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm29369-201ENSMUST00000190674 615 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm7270-201ENSMUST00000195818 1128 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm43476-201ENSMUST00000197873 405 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm18691-201ENSMUST00000203593 872 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm17997-201ENSMUST00000211801 840 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 CT571256.1-201ENSMUST00000226045 585 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 AW822073-201ENSMUST00000075305 555 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 n-R5s29-201ENSMUST00000082836 119 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 AC161247.1-201ENSMUST00000217744 2295 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Gm43410-201ENSMUST00000197510 2234 ntBASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Scaf4Q6PFF0 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm24986-201ENSMUST00000104452 132 ntBASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm25724-201ENSMUST00000104531 117 ntBASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm11976-201ENSMUST00000119236 295 ntBASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Defa-ps14-201ENSMUST00000121373 418 ntBASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Defa-ps10-201ENSMUST00000121649 171 ntBASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm25052-201ENSMUST00000122661 158 ntBASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm11545-201ENSMUST00000146507 375 ntBASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm23082-201ENSMUST00000157852 133 ntBASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Gm15508-201ENSMUST00000160330 325 ntBASIC6.52□□□□□ -1.37
Scaf4Q6PFF0 Mir1231-201ENSMUST00000175639 81 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms