Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Gm43724-201ENSMUST00000197516 226 ntBASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Gm43743-202ENSMUST00000198353 491 ntBASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Gm7733-201ENSMUST00000199038 919 ntBASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Gm5735-201ENSMUST00000207053 167 ntBASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Gm18587-201ENSMUST00000213736 841 ntBASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Nup98Q6PFD9 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Nup98Q6PFD9 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Nup98Q6PFD9 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC6.88□□□□□ -1.31
Nup98Q6PFD9 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Nup98Q6PFD9 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Nup98Q6PFD9 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Nup98Q6PFD9 Gm15428-201ENSMUST00000121352 333 ntBASIC6.88□□□□□ -1.31
Nup98Q6PFD9 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC6.88□□□□□ -1.31
Nup98Q6PFD9 Gm20397-201ENSMUST00000174520 362 ntBASIC6.88□□□□□ -1.31
Nup98Q6PFD9 Gm38015-201ENSMUST00000193048 188 ntBASIC6.88□□□□□ -1.31
Nup98Q6PFD9 Gm18553-201ENSMUST00000194152 634 ntBASIC6.88□□□□□ -1.31
Nup98Q6PFD9 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC6.88□□□□□ -1.31
Nup98Q6PFD9 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC6.88□□□□□ -1.31
Nup98Q6PFD9 CT009600.1-201ENSMUST00000228771 337 ntBASIC6.88□□□□□ -1.31
Nup98Q6PFD9 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Nup98Q6PFD9 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Nup98Q6PFD9 Mir218-2-201ENSMUST00000083649 110 ntBASIC6.88□□□□□ -1.31
Nup98Q6PFD9 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC6.88□□□□□ -1.31
Nup98Q6PFD9 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Nup98Q6PFD9 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Nup98Q6PFD9 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Nup98Q6PFD9 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Nup98Q6PFD9 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.88□□□□□ -1.31
Nup98Q6PFD9 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Nup98Q6PFD9 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Nup98Q6PFD9 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Nup98Q6PFD9 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Nup98Q6PFD9 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC6.88□□□□□ -1.31
Nup98Q6PFD9 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Nup98Q6PFD9 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC6.88□□□□□ -1.31
Nup98Q6PFD9 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Nup98Q6PFD9 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Gm13887-201ENSMUST00000119009 344 ntBASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Gm7079-201ENSMUST00000119726 171 ntBASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Gm13593-201ENSMUST00000121329 692 ntBASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Gm7309-201ENSMUST00000121670 581 ntBASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Gm17511-201ENSMUST00000172206 342 ntBASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Gm8321-201ENSMUST00000181691 980 ntBASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Gm27541-201ENSMUST00000184078 122 ntBASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Gm37932-201ENSMUST00000192258 1167 ntBASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Gm37773-201ENSMUST00000194141 2120 ntBASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Gm29755-201ENSMUST00000196976 948 ntBASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Gm5027-201ENSMUST00000206700 375 ntBASIC6.87□□□□□ -1.31
Nup98Q6PFD9 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Nup98Q6PFD9 AC154636.1-201ENSMUST00000223226 126 ntBASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Epha5-201ENSMUST00000053733 7328 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Nup98Q6PFD9 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Gm37474-201ENSMUST00000194812 1814 ntBASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Gm44667-201ENSMUST00000207632 3337 ntBASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Gm5182-201ENSMUST00000217708 6092 ntBASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Nup98Q6PFD9 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC6.87□□□□□ -1.31
Nup98Q6PFD9 LOC102637012-201ENSMUST00000217248 2562 ntBASIC6.87□□□□□ -1.31
Nup98Q6PFD9 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Mup-ps19-201ENSMUST00000120390 519 ntBASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Gm14620-201ENSMUST00000120656 383 ntBASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Gm27193-201ENSMUST00000184217 586 ntBASIC6.87□□□□□ -1.31
Nup98Q6PFD9 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms