Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Gm43258-201ENSMUST00000200312 1950 ntBASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Gm9836-201ENSMUST00000117132 216 ntBASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Gm7700-201ENSMUST00000120273 970 ntBASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Gm23430-201ENSMUST00000122490 314 ntBASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Gm24767-201ENSMUST00000158509 95 ntBASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Mir7082-201ENSMUST00000183526 92 ntBASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Gm5692-201ENSMUST00000187254 1057 ntBASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Gm43222-201ENSMUST00000199013 603 ntBASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Gm7181-201ENSMUST00000202197 434 ntBASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Gm4803-201ENSMUST00000218729 1279 ntBASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Gm42611-201ENSMUST00000199446 3407 ntBASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 AC120375.1-201ENSMUST00000227034 3612 ntBASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Gm37076-201ENSMUST00000192033 2294 ntBASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Gm38128-201ENSMUST00000192085 3250 ntBASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Gm43328-201ENSMUST00000198544 1434 ntBASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Gm45838-201ENSMUST00000207355 2447 ntBASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm18757-201ENSMUST00000207938 3141 ntBASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm5512-201ENSMUST00000218013 1353 ntBASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 AC156163.1-201ENSMUST00000215598 3369 ntBASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm20486-201ENSMUST00000101544 128 ntBASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm14772-201ENSMUST00000116562 514 ntBASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm10410-201ENSMUST00000180138 384 ntBASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm26898-201ENSMUST00000181678 384 ntBASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Mir6244-201ENSMUST00000184156 117 ntBASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm29124-201ENSMUST00000186576 452 ntBASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm28066-201ENSMUST00000188657 472 ntBASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm28996-201ENSMUST00000190316 721 ntBASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm37196-201ENSMUST00000194762 906 ntBASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm44053-201ENSMUST00000203364 929 ntBASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm44239-201ENSMUST00000204228 271 ntBASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm45156-201ENSMUST00000207255 439 ntBASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm7499-201ENSMUST00000210423 813 ntBASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm45850-201ENSMUST00000212536 338 ntBASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 AC155941.1-201ENSMUST00000220223 529 ntBASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 AC156037.1-201ENSMUST00000221133 127 ntBASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 AC125543.3-201ENSMUST00000221991 126 ntBASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 CU062626.1-201ENSMUST00000225248 505 ntBASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm43891-201ENSMUST00000205132 3112 ntBASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm43330-201ENSMUST00000199706 2153 ntBASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC6.32□□□□□ -1.4
Upf3bQ3ULL6 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms