Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 AC113031.2-201ENSMUST00000226132 579 ntBASIC5.09□□□□□ -1.59
Cdx4Q07424 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdx4Q07424 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Cdx4Q07424 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Cdx4Q07424 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Cdx4Q07424 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC5.09□□□□□ -1.59
Cdx4Q07424 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdx4Q07424 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
Cdx4Q07424 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Cdx4Q07424 Gm37023-201ENSMUST00000192895 2426 ntBASIC5.09□□□□□ -1.59
Cdx4Q07424 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Cdx4Q07424 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Cdx4Q07424 Gm37685-201ENSMUST00000193507 2177 ntBASIC5.09□□□□□ -1.59
Cdx4Q07424 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Cdx4Q07424 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC5.09□□□□□ -1.6
Cdx4Q07424 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Cdx4Q07424 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Cdx4Q07424 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Cdx4Q07424 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Cdx4Q07424 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC5.09□□□□□ -1.6
Cdx4Q07424 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC5.09□□□□□ -1.6
Cdx4Q07424 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm38077-201ENSMUST00000193657 3245 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm42989-201ENSMUST00000200646 2306 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm16123-201ENSMUST00000118647 1517 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx4Q07424 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx4Q07424 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx4Q07424 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx4Q07424 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx4Q07424 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm12468-201ENSMUST00000116189 404 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm13400-201ENSMUST00000117436 380 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm11833-201ENSMUST00000118393 853 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm12189-201ENSMUST00000119779 912 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Mup-ps13-201ENSMUST00000120662 545 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Mup-ps1-201ENSMUST00000120720 544 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm7212-201ENSMUST00000120817 348 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm16471-201ENSMUST00000121940 618 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm14847-201ENSMUST00000121978 519 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm22223-201ENSMUST00000157360 125 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm26000-201ENSMUST00000157991 107 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm26487-201ENSMUST00000158022 94 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm20530-201ENSMUST00000174261 254 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm16456-201ENSMUST00000174431 920 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx4Q07424 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdx4Q07424 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm27864-201ENSMUST00000183704 190 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm4856-201ENSMUST00000192696 1091 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm44253-201ENSMUST00000203387 628 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm44856-201ENSMUST00000206639 304 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx4Q07424 AL603745.1-201ENSMUST00000215473 532 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm46103-201ENSMUST00000217614 341 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm46203-201ENSMUST00000218130 478 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC5.08□□□□□ -1.6
Cdx4Q07424 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Cdx4Q07424 AC154640.1-202ENSMUST00000227828 496 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 AC130547.1-201ENSMUST00000228079 1047 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 AC133203.1-201ENSMUST00000228241 301 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 AC154806.5-205ENSMUST00000228828 411 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx4Q07424 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx4Q07424 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx4Q07424 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Cdx4Q07424 Gm42668-201ENSMUST00000200747 2487 ntBASIC5.08□□□□□ -1.6
Cdx4Q07424 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms