Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm30698-201ENSMUST00000214789 3198 ntBASIC6.79□□□□□ -1.32
Sox9Q04887 Gm37906-201ENSMUST00000192050 3035 ntBASIC6.79□□□□□ -1.32
Sox9Q04887 Gm28379-202ENSMUST00000187676 2896 ntBASIC6.79□□□□□ -1.32
Sox9Q04887 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox9Q04887 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
Sox9Q04887 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.79□□□□□ -1.32
Sox9Q04887 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox9Q04887 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Sox9Q04887 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox9Q04887 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox9Q04887 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox9Q04887 Gm37470-201ENSMUST00000193378 2798 ntBASIC6.79□□□□□ -1.32
Sox9Q04887 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox9Q04887 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.79□□□□□ -1.32
Sox9Q04887 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Sox9Q04887 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox9Q04887 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox9Q04887 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox9Q04887 Gm7146-201ENSMUST00000116079 739 ntBASIC6.79□□□□□ -1.32
Sox9Q04887 Gm12193-201ENSMUST00000117250 379 ntBASIC6.79□□□□□ -1.32
Sox9Q04887 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC6.79□□□□□ -1.32
Sox9Q04887 Gm12677-201ENSMUST00000118668 426 ntBASIC6.79□□□□□ -1.32
Sox9Q04887 Gm14521-201ENSMUST00000119545 350 ntBASIC6.79□□□□□ -1.32
Sox9Q04887 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox9Q04887 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.79□□□□□ -1.32
Sox9Q04887 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox9Q04887 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox9Q04887 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC6.79□□□□□ -1.32
Sox9Q04887 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC6.79□□□□□ -1.32
Sox9Q04887 Gm22693-201ENSMUST00000175049 442 ntBASIC6.79□□□□□ -1.32
Sox9Q04887 Gm23164-201ENSMUST00000175084 111 ntBASIC6.79□□□□□ -1.32
Sox9Q04887 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC6.79□□□□□ -1.32
Sox9Q04887 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Sox9Q04887 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox9Q04887 Gm29159-201ENSMUST00000187969 379 ntBASIC6.79□□□□□ -1.32
Sox9Q04887 Gm43212-201ENSMUST00000198208 394 ntBASIC6.79□□□□□ -1.32
Sox9Q04887 Gm18748-201ENSMUST00000198507 622 ntBASIC6.79□□□□□ -1.32
Sox9Q04887 Gm43794-201ENSMUST00000200971 692 ntBASIC6.79□□□□□ -1.32
Sox9Q04887 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC6.79□□□□□ -1.32
Sox9Q04887 Gm44688-201ENSMUST00000209083 537 ntBASIC6.79□□□□□ -1.32
Sox9Q04887 Gm46223-201ENSMUST00000215196 675 ntBASIC6.79□□□□□ -1.32
Sox9Q04887 Gm19987-201ENSMUST00000216339 499 ntBASIC6.79□□□□□ -1.32
Sox9Q04887 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox9Q04887 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Sox9Q04887 Mir484-201ENSMUST00000093566 67 ntBASIC6.79□□□□□ -1.32
Sox9Q04887 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Sox9Q04887 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox9Q04887 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Sox9Q04887 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox9Q04887 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox9Q04887 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Sox9Q04887 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox9Q04887 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox9Q04887 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC6.79□□□□□ -1.32
Sox9Q04887 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox9Q04887 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox9Q04887 Gm45112-201ENSMUST00000208576 5125 ntBASIC6.79□□□□□ -1.32
Sox9Q04887 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Sox9Q04887 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Sox9Q04887 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Sox9Q04887 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
Sox9Q04887 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox9Q04887 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC6.78□□□□□ -1.32
Sox9Q04887 Gm7869-201ENSMUST00000121457 1322 ntBASIC6.78□□□□□ -1.32
Sox9Q04887 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Sox9Q04887 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox9Q04887 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC6.78□□□□□ -1.32
Sox9Q04887 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox9Q04887 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox9Q04887 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Sox9Q04887 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox9Q04887 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Sox9Q04887 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox9Q04887 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC6.78□□□□□ -1.32
Sox9Q04887 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6.78□□□□□ -1.32
Sox9Q04887 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox9Q04887 Gm20486-201ENSMUST00000101544 128 ntBASIC6.78□□□□□ -1.32
Sox9Q04887 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox9Q04887 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC6.78□□□□□ -1.32
Sox9Q04887 Gm13455-201ENSMUST00000118767 517 ntBASIC6.78□□□□□ -1.32
Sox9Q04887 Gm14335-201ENSMUST00000119165 810 ntBASIC6.78□□□□□ -1.32
Sox9Q04887 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC6.78□□□□□ -1.32
Sox9Q04887 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC6.78□□□□□ -1.32
Sox9Q04887 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC6.78□□□□□ -1.32
Sox9Q04887 Gm25824-201ENSMUST00000157092 121 ntBASIC6.78□□□□□ -1.32
Sox9Q04887 Gm23662-201ENSMUST00000158046 111 ntBASIC6.78□□□□□ -1.32
Sox9Q04887 Gm24363-201ENSMUST00000158440 311 ntBASIC6.78□□□□□ -1.32
Sox9Q04887 Gm26401-201ENSMUST00000158502 76 ntBASIC6.78□□□□□ -1.32
Sox9Q04887 Gm9064-201ENSMUST00000163579 566 ntBASIC6.78□□□□□ -1.32
Sox9Q04887 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC6.78□□□□□ -1.32
Sox9Q04887 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC6.78□□□□□ -1.32
Sox9Q04887 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox9Q04887 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox9Q04887 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Sox9Q04887 Gm36638-201ENSMUST00000193295 400 ntBASIC6.78□□□□□ -1.32
Sox9Q04887 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC6.78□□□□□ -1.32
Sox9Q04887 Gm18611-201ENSMUST00000200334 1118 ntBASIC6.78□□□□□ -1.32
Sox9Q04887 Gm31520-201ENSMUST00000203048 733 ntBASIC6.78□□□□□ -1.32
Sox9Q04887 Gm19653-201ENSMUST00000204326 1039 ntBASIC6.78□□□□□ -1.32
Sox9Q04887 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 296.7 ms