Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm25415-201ENSMUST00000104220 132 ntBASIC5.22□□□□□ -1.57
Nkx3-1P97436 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm13451-201ENSMUST00000117649 592 ntBASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm15048-201ENSMUST00000118201 954 ntBASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm12901-201ENSMUST00000118690 532 ntBASIC5.22□□□□□ -1.57
Nkx3-1P97436 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm14335-201ENSMUST00000119165 810 ntBASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm13245-201ENSMUST00000119646 260 ntBASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm5387-201ENSMUST00000119776 857 ntBASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm16423-201ENSMUST00000120078 947 ntBASIC5.22□□□□□ -1.57
Nkx3-1P97436 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm25962-201ENSMUST00000157173 168 ntBASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm2959-201ENSMUST00000169844 621 ntBASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm21756-201ENSMUST00000178380 930 ntBASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm21405-201ENSMUST00000179024 930 ntBASIC5.22□□□□□ -1.57
Nkx3-1P97436 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm27004-201ENSMUST00000183300 727 ntBASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm21191-201ENSMUST00000186484 930 ntBASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm29503-201ENSMUST00000191044 930 ntBASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Ighv5-19-201ENSMUST00000193466 297 ntBASIC5.22□□□□□ -1.57
Nkx3-1P97436 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm45070-201ENSMUST00000208100 246 ntBASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm9685-201ENSMUST00000211275 538 ntBASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm46192-201ENSMUST00000217894 326 ntBASIC5.22□□□□□ -1.57
Nkx3-1P97436 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.22□□□□□ -1.57
Nkx3-1P97436 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.22□□□□□ -1.57
Nkx3-1P97436 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx3-1P97436 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.22□□□□□ -1.57
Nkx3-1P97436 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx3-1P97436 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.22□□□□□ -1.57
Nkx3-1P97436 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx3-1P97436 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Nkx3-1P97436 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Nkx3-1P97436 Gm44750-201ENSMUST00000206185 2223 ntBASIC5.21□□□□□ -1.57
Nkx3-1P97436 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
Nkx3-1P97436 Gm44046-201ENSMUST00000203145 2678 ntBASIC5.21□□□□□ -1.57
Nkx3-1P97436 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
Nkx3-1P97436 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Nkx3-1P97436 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Nkx3-1P97436 Gm11242-201ENSMUST00000120103 2457 ntBASIC5.21□□□□□ -1.57
Nkx3-1P97436 Gm42727-201ENSMUST00000202446 2823 ntBASIC5.21□□□□□ -1.57
Nkx3-1P97436 AC113031.7-201ENSMUST00000228609 1928 ntBASIC5.21□□□□□ -1.57
Nkx3-1P97436 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
Nkx3-1P97436 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Nkx3-1P97436 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Nkx3-1P97436 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Nkx3-1P97436 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Nkx3-1P97436 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Nkx3-1P97436 Gm14895-201ENSMUST00000121858 1361 ntBASIC5.21□□□□□ -1.58
Nkx3-1P97436 Gm8401-201ENSMUST00000120248 1739 ntBASIC5.21□□□□□ -1.58
Nkx3-1P97436 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Nkx3-1P97436 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Nkx3-1P97436 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Nkx3-1P97436 Gm14510-201ENSMUST00000116165 1092 ntBASIC5.21□□□□□ -1.58
Nkx3-1P97436 Gm14783-201ENSMUST00000118900 663 ntBASIC5.21□□□□□ -1.58
Nkx3-1P97436 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
Nkx3-1P97436 Gm8061-201ENSMUST00000122380 350 ntBASIC5.21□□□□□ -1.58
Nkx3-1P97436 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC5.21□□□□□ -1.58
Nkx3-1P97436 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC5.21□□□□□ -1.58
Nkx3-1P97436 Gm23250-201ENSMUST00000157444 267 ntBASIC5.21□□□□□ -1.58
Nkx3-1P97436 Gm6808-201ENSMUST00000162341 807 ntBASIC5.21□□□□□ -1.58
Nkx3-1P97436 Mir3095-201ENSMUST00000175552 87 ntBASIC5.21□□□□□ -1.58
Nkx3-1P97436 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms