Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.31□□□□□ -1.56
H3f3aP84244 Gm44193-201ENSMUST00000204822 2523 ntBASIC5.31□□□□□ -1.56
H3f3aP84244 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3f3aP84244 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.31□□□□□ -1.56
H3f3aP84244 Gm44750-201ENSMUST00000206185 2223 ntBASIC5.31□□□□□ -1.56
H3f3aP84244 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3f3aP84244 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.31□□□□□ -1.56
H3f3aP84244 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3f3aP84244 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3f3aP84244 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
H3f3aP84244 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.31□□□□□ -1.56
H3f3aP84244 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
H3f3aP84244 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
H3f3aP84244 Gm37238-201ENSMUST00000195552 2390 ntBASIC5.3□□□□□ -1.56
H3f3aP84244 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
H3f3aP84244 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
H3f3aP84244 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
H3f3aP84244 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC5.3□□□□□ -1.56
H3f3aP84244 Gm43258-201ENSMUST00000200312 1950 ntBASIC5.3□□□□□ -1.56
H3f3aP84244 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
H3f3aP84244 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC5.3□□□□□ -1.56
H3f3aP84244 Gm14970-201ENSMUST00000122289 355 ntBASIC5.3□□□□□ -1.56
H3f3aP84244 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC5.3□□□□□ -1.56
H3f3aP84244 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC5.3□□□□□ -1.56
H3f3aP84244 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.3□□□□□ -1.56
H3f3aP84244 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
H3f3aP84244 Gm9671-201ENSMUST00000171502 547 ntBASIC5.3□□□□□ -1.56
H3f3aP84244 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
H3f3aP84244 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
H3f3aP84244 Gm10410-201ENSMUST00000180138 384 ntBASIC5.3□□□□□ -1.56
H3f3aP84244 Gm26607-201ENSMUST00000180661 867 ntBASIC5.3□□□□□ -1.56
H3f3aP84244 Gm26898-201ENSMUST00000181678 384 ntBASIC5.3□□□□□ -1.56
H3f3aP84244 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC5.3□□□□□ -1.56
H3f3aP84244 Ighv1-10-201ENSMUST00000194372 355 ntBASIC5.3□□□□□ -1.56
H3f3aP84244 Gm37196-201ENSMUST00000194762 906 ntBASIC5.3□□□□□ -1.56
H3f3aP84244 Gm44219-201ENSMUST00000203005 273 ntBASIC5.3□□□□□ -1.56
H3f3aP84244 Gm44312-201ENSMUST00000203536 469 ntBASIC5.3□□□□□ -1.56
H3f3aP84244 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC5.3□□□□□ -1.56
H3f3aP84244 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC5.3□□□□□ -1.56
H3f3aP84244 Api5-ps-201ENSMUST00000206607 577 ntBASIC5.3□□□□□ -1.56
H3f3aP84244 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
H3f3aP84244 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
H3f3aP84244 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.3□□□□□ -1.56
H3f3aP84244 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.3□□□□□ -1.56
H3f3aP84244 Gm4803-201ENSMUST00000218729 1279 ntBASIC5.3□□□□□ -1.56
H3f3aP84244 AC153357.1-201ENSMUST00000219190 482 ntBASIC5.3□□□□□ -1.56
H3f3aP84244 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC5.3□□□□□ -1.56
H3f3aP84244 AC170810.1-201ENSMUST00000228267 672 ntBASIC5.3□□□□□ -1.56
H3f3aP84244 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
H3f3aP84244 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
H3f3aP84244 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
H3f3aP84244 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
H3f3aP84244 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
H3f3aP84244 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
H3f3aP84244 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
H3f3aP84244 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
H3f3aP84244 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
H3f3aP84244 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
H3f3aP84244 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
H3f3aP84244 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
H3f3aP84244 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.3□□□□□ -1.56
H3f3aP84244 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
H3f3aP84244 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
H3f3aP84244 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
H3f3aP84244 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
H3f3aP84244 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
H3f3aP84244 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.29□□□□□ -1.56
H3f3aP84244 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.29□□□□□ -1.56
H3f3aP84244 Gm9519-201ENSMUST00000206108 1337 ntBASIC5.29□□□□□ -1.56
H3f3aP84244 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
H3f3aP84244 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
H3f3aP84244 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
H3f3aP84244 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
H3f3aP84244 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
H3f3aP84244 Gm25917-201ENSMUST00000104267 130 ntBASIC5.29□□□□□ -1.56
H3f3aP84244 Gm14529-201ENSMUST00000117894 406 ntBASIC5.29□□□□□ -1.56
H3f3aP84244 Gm13772-201ENSMUST00000118431 317 ntBASIC5.29□□□□□ -1.56
H3f3aP84244 Gm4234-201ENSMUST00000119747 714 ntBASIC5.29□□□□□ -1.56
H3f3aP84244 Gm7700-201ENSMUST00000120273 970 ntBASIC5.29□□□□□ -1.56
H3f3aP84244 Gm13531-201ENSMUST00000121893 543 ntBASIC5.29□□□□□ -1.56
H3f3aP84244 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC5.29□□□□□ -1.56
H3f3aP84244 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
H3f3aP84244 Gm24435-201ENSMUST00000157886 110 ntBASIC5.29□□□□□ -1.56
H3f3aP84244 Gm24733-201ENSMUST00000158863 253 ntBASIC5.29□□□□□ -1.56
H3f3aP84244 Gm16164-201ENSMUST00000160078 468 ntBASIC5.29□□□□□ -1.56
H3f3aP84244 Gm3715-201ENSMUST00000172308 617 ntBASIC5.29□□□□□ -1.56
H3f3aP84244 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC5.29□□□□□ -1.56
H3f3aP84244 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
H3f3aP84244 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
H3f3aP84244 Mir6362-201ENSMUST00000184329 107 ntBASIC5.29□□□□□ -1.56
H3f3aP84244 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
H3f3aP84244 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC5.29□□□□□ -1.56
H3f3aP84244 Gm43105-201ENSMUST00000202987 459 ntBASIC5.29□□□□□ -1.56
H3f3aP84244 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC5.29□□□□□ -1.56
H3f3aP84244 Gm18689-201ENSMUST00000203969 902 ntBASIC5.29□□□□□ -1.56
H3f3aP84244 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC5.29□□□□□ -1.56
H3f3aP84244 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.29□□□□□ -1.56
H3f3aP84244 AC134917.2-201ENSMUST00000223354 124 ntBASIC5.29□□□□□ -1.56
H3f3aP84244 AC164426.1-201ENSMUST00000225745 929 ntBASIC5.29□□□□□ -1.56
H3f3aP84244 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 111.9 ms