Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC5.81□□□□□ -1.48
Sox3P53784 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.81□□□□□ -1.48
Sox3P53784 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Sox3P53784 Gm22636-201ENSMUST00000158142 275 ntBASIC5.81□□□□□ -1.48
Sox3P53784 Gm26037-201ENSMUST00000158150 311 ntBASIC5.81□□□□□ -1.48
Sox3P53784 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Sox3P53784 Gm7335-201ENSMUST00000172475 373 ntBASIC5.81□□□□□ -1.48
Sox3P53784 Gm22932-201ENSMUST00000175510 72 ntBASIC5.81□□□□□ -1.48
Sox3P53784 Gm25019-201ENSMUST00000179732 110 ntBASIC5.81□□□□□ -1.48
Sox3P53784 Gm3650-201ENSMUST00000180600 747 ntBASIC5.81□□□□□ -1.48
Sox3P53784 Gm8321-201ENSMUST00000181691 980 ntBASIC5.81□□□□□ -1.48
Sox3P53784 Gm27158-201ENSMUST00000183813 238 ntBASIC5.81□□□□□ -1.48
Sox3P53784 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC5.81□□□□□ -1.48
Sox3P53784 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC5.81□□□□□ -1.48
Sox3P53784 Gm9480-201ENSMUST00000198038 616 ntBASIC5.81□□□□□ -1.48
Sox3P53784 Gm21461-201ENSMUST00000200382 863 ntBASIC5.81□□□□□ -1.48
Sox3P53784 Gm45127-201ENSMUST00000205984 1015 ntBASIC5.81□□□□□ -1.48
Sox3P53784 Gm45733-201ENSMUST00000212988 437 ntBASIC5.81□□□□□ -1.48
Sox3P53784 Gm8290-201ENSMUST00000218202 477 ntBASIC5.81□□□□□ -1.48
Sox3P53784 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC5.81□□□□□ -1.48
Sox3P53784 Gm9088-201ENSMUST00000220237 508 ntBASIC5.81□□□□□ -1.48
Sox3P53784 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC5.81□□□□□ -1.48
Sox3P53784 Gm9202-201ENSMUST00000223036 437 ntBASIC5.81□□□□□ -1.48
Sox3P53784 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC5.81□□□□□ -1.48
Sox3P53784 AC122858.1-202ENSMUST00000228290 986 ntBASIC5.81□□□□□ -1.48
Sox3P53784 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sox3P53784 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sox3P53784 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC5.81□□□□□ -1.48
Sox3P53784 AC192333.5-201ENSMUST00000224620 2350 ntBASIC5.81□□□□□ -1.48
Sox3P53784 Gm16523-202ENSMUST00000203640 4750 ntBASIC5.81□□□□□ -1.48
Sox3P53784 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sox3P53784 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Sox3P53784 Gm37342-201ENSMUST00000194588 4965 ntBASIC5.8□□□□□ -1.48
Sox3P53784 AC140393.3-201ENSMUST00000228396 1352 ntBASIC5.8□□□□□ -1.48
Sox3P53784 CT025675.1-201ENSMUST00000228171 1567 ntBASIC5.8□□□□□ -1.48
Sox3P53784 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Sox3P53784 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC5.8□□□□□ -1.48
Sox3P53784 Gm18880-201ENSMUST00000223333 1541 ntBASIC5.8□□□□□ -1.48
Sox3P53784 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Sox3P53784 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox3P53784 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox3P53784 Gm42440-201ENSMUST00000197906 2284 ntBASIC5.8□□□□□ -1.48
Sox3P53784 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox3P53784 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sox3P53784 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sox3P53784 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Sox3P53784 Gm12937-201ENSMUST00000118333 448 ntBASIC5.8□□□□□ -1.48
Sox3P53784 Gm13533-201ENSMUST00000121104 177 ntBASIC5.8□□□□□ -1.48
Sox3P53784 Gm11894-201ENSMUST00000121579 328 ntBASIC5.8□□□□□ -1.48
Sox3P53784 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.8□□□□□ -1.48
Sox3P53784 Gm26489-201ENSMUST00000157880 264 ntBASIC5.8□□□□□ -1.48
Sox3P53784 Gm25013-201ENSMUST00000158402 128 ntBASIC5.8□□□□□ -1.48
Sox3P53784 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC5.8□□□□□ -1.48
Sox3P53784 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox3P53784 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox3P53784 Gm29454-201ENSMUST00000190805 393 ntBASIC5.8□□□□□ -1.48
Sox3P53784 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC5.8□□□□□ -1.48
Sox3P53784 Gm42799-201ENSMUST00000201331 328 ntBASIC5.8□□□□□ -1.48
Sox3P53784 Gm7832-201ENSMUST00000202613 880 ntBASIC5.8□□□□□ -1.48
Sox3P53784 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.8□□□□□ -1.48
Sox3P53784 Gm33601-201ENSMUST00000210001 961 ntBASIC5.8□□□□□ -1.48
Sox3P53784 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC5.8□□□□□ -1.48
Sox3P53784 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox3P53784 Gm45874-201ENSMUST00000212423 346 ntBASIC5.8□□□□□ -1.48
Sox3P53784 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC5.8□□□□□ -1.48
Sox3P53784 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sox3P53784 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC5.8□□□□□ -1.48
Sox3P53784 AC134254.2-201ENSMUST00000221262 170 ntBASIC5.8□□□□□ -1.48
Sox3P53784 AC105950.1-201ENSMUST00000222637 408 ntBASIC5.8□□□□□ -1.48
Sox3P53784 Gm19154-201ENSMUST00000223330 940 ntBASIC5.8□□□□□ -1.48
Sox3P53784 AC113269.1-201ENSMUST00000227185 674 ntBASIC5.8□□□□□ -1.48
Sox3P53784 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox3P53784 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sox3P53784 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sox3P53784 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox3P53784 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox3P53784 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox3P53784 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sox3P53784 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox3P53784 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox3P53784 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox3P53784 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox3P53784 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC5.8□□□□□ -1.48
Sox3P53784 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox3P53784 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox3P53784 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox3P53784 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox3P53784 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox3P53784 Gm4994-201ENSMUST00000118379 2187 ntBASIC5.8□□□□□ -1.48
Sox3P53784 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox3P53784 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
Sox3P53784 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC5.8□□□□□ -1.48
Sox3P53784 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
Sox3P53784 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
Sox3P53784 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox3P53784 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox3P53784 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sox3P53784 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sox3P53784 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sox3P53784 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms