Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm6474-201ENSMUST00000223250 699 ntBASIC9.08□□□□□ -0.96
Cux1P53564 AC156016.5-201ENSMUST00000228742 355 ntBASIC9.08□□□□□ -0.96
Cux1P53564 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cux1P53564 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cux1P53564 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cux1P53564 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cux1P53564 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Cux1P53564 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Cux1P53564 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Cux1P53564 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Cux1P53564 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Cux1P53564 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cux1P53564 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cux1P53564 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cux1P53564 Gm12074-201ENSMUST00000120189 219 ntBASIC9.07□□□□□ -0.96
Cux1P53564 Mir7006-201ENSMUST00000183624 69 ntBASIC9.07□□□□□ -0.96
Cux1P53564 Gm28429-201ENSMUST00000188521 363 ntBASIC9.07□□□□□ -0.96
Cux1P53564 Igkv15-101-201ENSMUST00000195917 299 ntBASIC9.07□□□□□ -0.96
Cux1P53564 Gm44984-201ENSMUST00000207802 394 ntBASIC9.07□□□□□ -0.96
Cux1P53564 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC9.07□□□□□ -0.96
Cux1P53564 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC9.07□□□□□ -0.96
Cux1P53564 AC154636.1-201ENSMUST00000223226 126 ntBASIC9.07□□□□□ -0.96
Cux1P53564 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cux1P53564 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC9.07□□□□□ -0.96
Cux1P53564 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Cux1P53564 Dennd6a-203ENSMUST00000224111 2692 ntBASIC9.07□□□□□ -0.96
Cux1P53564 Gm43162-201ENSMUST00000198292 1770 ntBASIC9.07□□□□□ -0.96
Cux1P53564 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cux1P53564 Gm42661-201ENSMUST00000202364 1442 ntBASIC9.07□□□□□ -0.96
Cux1P53564 Gm42561-201ENSMUST00000202563 1442 ntBASIC9.07□□□□□ -0.96
Cux1P53564 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Cux1P53564 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Cux1P53564 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC9.07□□□□□ -0.96
Cux1P53564 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
Cux1P53564 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cux1P53564 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cux1P53564 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
Cux1P53564 Gm15186-201ENSMUST00000119345 563 ntBASIC9.06□□□□□ -0.96
Cux1P53564 Gm13991-201ENSMUST00000120190 648 ntBASIC9.06□□□□□ -0.96
Cux1P53564 Gm8358-201ENSMUST00000167222 555 ntBASIC9.06□□□□□ -0.96
Cux1P53564 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC9.06□□□□□ -0.96
Cux1P53564 Gm42437-201ENSMUST00000197263 923 ntBASIC9.06□□□□□ -0.96
Cux1P53564 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC9.06□□□□□ -0.96
Cux1P53564 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC9.06□□□□□ -0.96
Cux1P53564 AC154452.1-201ENSMUST00000225819 241 ntBASIC9.06□□□□□ -0.96
Cux1P53564 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cux1P53564 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cux1P53564 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cux1P53564 AC114585.1-201ENSMUST00000228080 3680 ntBASIC9.06□□□□□ -0.96
Cux1P53564 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cux1P53564 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cux1P53564 Brca1-201ENSMUST00000017290 6572 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cux1P53564 Gm8401-201ENSMUST00000120248 1739 ntBASIC9.06□□□□□ -0.96
Cux1P53564 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cux1P53564 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cux1P53564 Gm37429-201ENSMUST00000193807 1799 ntBASIC9.06□□□□□ -0.96
Cux1P53564 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Cux1P53564 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Cux1P53564 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Cux1P53564 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.96
Cux1P53564 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cux1P53564 Gm12303-201ENSMUST00000119506 673 ntBASIC9.05□□□□□ -0.96
Cux1P53564 Gm11825-201ENSMUST00000120710 736 ntBASIC9.05□□□□□ -0.96
Cux1P53564 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC9.05□□□□□ -0.96
Cux1P53564 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC9.05□□□□□ -0.96
Cux1P53564 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cux1P53564 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cux1P53564 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC9.05□□□□□ -0.96
Cux1P53564 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC9.05□□□□□ -0.96
Cux1P53564 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC9.05□□□□□ -0.96
Cux1P53564 AC153961.2-201ENSMUST00000218877 164 ntBASIC9.05□□□□□ -0.96
Cux1P53564 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Cux1P53564 Gm23795-201ENSMUST00000084006 137 ntBASIC9.05□□□□□ -0.96
Cux1P53564 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Cux1P53564 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Cux1P53564 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cux1P53564 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cux1P53564 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cux1P53564 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Cux1P53564 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Cux1P53564 Gm37482-201ENSMUST00000194899 2791 ntBASIC9.05□□□□□ -0.96
Cux1P53564 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Cux1P53564 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cux1P53564 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
Cux1P53564 Gm42975-201ENSMUST00000200612 1491 ntBASIC9.05□□□□□ -0.96
Cux1P53564 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cux1P53564 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC9.05□□□□□ -0.96
Cux1P53564 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Cux1P53564 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Cux1P53564 Gm8980-201ENSMUST00000140232 2197 ntBASIC9.05□□□□□ -0.96
Cux1P53564 Gm12808-201ENSMUST00000120597 404 ntBASIC9.05□□□□□ -0.96
Cux1P53564 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.96
Cux1P53564 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC9.05□□□□□ -0.96
Cux1P53564 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC9.05□□□□□ -0.96
Cux1P53564 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Cux1P53564 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
Cux1P53564 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Cux1P53564 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC9.05□□□□□ -0.96
Cux1P53564 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC9.05□□□□□ -0.96
Cux1P53564 Gm43631-201ENSMUST00000202011 369 ntBASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms