Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.65□□□□□ -1.35
Shmt1P50431 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Shmt1P50431 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
Shmt1P50431 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
Shmt1P50431 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
Shmt1P50431 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Shmt1P50431 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Shmt1P50431 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Shmt1P50431 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Shmt1P50431 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Shmt1P50431 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Shmt1P50431 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
Shmt1P50431 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Shmt1P50431 Gm43872-201ENSMUST00000203218 2213 ntBASIC6.64□□□□□ -1.35
Shmt1P50431 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Shmt1P50431 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Shmt1P50431 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Shmt1P50431 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC6.64□□□□□ -1.35
Shmt1P50431 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC6.64□□□□□ -1.35
Shmt1P50431 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Shmt1P50431 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Shmt1P50431 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC6.64□□□□□ -1.35
Shmt1P50431 Gm25271-201ENSMUST00000157273 290 ntBASIC6.64□□□□□ -1.35
Shmt1P50431 Gm24687-201ENSMUST00000157758 241 ntBASIC6.64□□□□□ -1.35
Shmt1P50431 Gm24343-201ENSMUST00000158708 111 ntBASIC6.64□□□□□ -1.35
Shmt1P50431 Gm23819-201ENSMUST00000158744 109 ntBASIC6.64□□□□□ -1.35
Shmt1P50431 Gm17198-201ENSMUST00000171792 1154 ntBASIC6.64□□□□□ -1.35
Shmt1P50431 Gm27512-201ENSMUST00000175328 126 ntBASIC6.64□□□□□ -1.35
Shmt1P50431 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC6.64□□□□□ -1.35
Shmt1P50431 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC6.64□□□□□ -1.35
Shmt1P50431 Gm37475-201ENSMUST00000193107 1015 ntBASIC6.64□□□□□ -1.35
Shmt1P50431 Gm34768-201ENSMUST00000193884 565 ntBASIC6.64□□□□□ -1.35
Shmt1P50431 Gm7166-201ENSMUST00000199715 303 ntBASIC6.64□□□□□ -1.35
Shmt1P50431 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC6.64□□□□□ -1.35
Shmt1P50431 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC6.64□□□□□ -1.35
Shmt1P50431 Gm18009-201ENSMUST00000203239 1016 ntBASIC6.64□□□□□ -1.35
Shmt1P50431 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC6.64□□□□□ -1.35
Shmt1P50431 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC6.64□□□□□ -1.35
Shmt1P50431 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Shmt1P50431 Gm18598-201ENSMUST00000207724 597 ntBASIC6.64□□□□□ -1.35
Shmt1P50431 Gm22971-201ENSMUST00000083305 97 ntBASIC6.64□□□□□ -1.35
Shmt1P50431 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Shmt1P50431 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Shmt1P50431 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Shmt1P50431 AC123629.1-201ENSMUST00000225669 1364 ntBASIC6.64□□□□□ -1.35
Shmt1P50431 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Shmt1P50431 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Shmt1P50431 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Shmt1P50431 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
Shmt1P50431 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC6.64□□□□□ -1.35
Shmt1P50431 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Shmt1P50431 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Shmt1P50431 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
Shmt1P50431 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC6.64□□□□□ -1.35
Shmt1P50431 Gm44229-201ENSMUST00000203211 2487 ntBASIC6.64□□□□□ -1.35
Shmt1P50431 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.63□□□□□ -1.35
Shmt1P50431 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.63□□□□□ -1.35
Shmt1P50431 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Shmt1P50431 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Shmt1P50431 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Shmt1P50431 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Shmt1P50431 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Shmt1P50431 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC6.63□□□□□ -1.35
Shmt1P50431 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Shmt1P50431 Gm22710-201ENSMUST00000116892 125 ntBASIC6.63□□□□□ -1.35
Shmt1P50431 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
Shmt1P50431 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC6.63□□□□□ -1.35
Shmt1P50431 Gm14369-201ENSMUST00000121355 285 ntBASIC6.63□□□□□ -1.35
Shmt1P50431 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC6.63□□□□□ -1.35
Shmt1P50431 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Shmt1P50431 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Shmt1P50431 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC6.63□□□□□ -1.35
Shmt1P50431 Gm16269-201ENSMUST00000160532 409 ntBASIC6.63□□□□□ -1.35
Shmt1P50431 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC6.63□□□□□ -1.35
Shmt1P50431 Gm9027-201ENSMUST00000165914 661 ntBASIC6.63□□□□□ -1.35
Shmt1P50431 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Shmt1P50431 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Shmt1P50431 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Shmt1P50431 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Shmt1P50431 Gm27817-201ENSMUST00000184302 233 ntBASIC6.63□□□□□ -1.35
Shmt1P50431 Gm28885-201ENSMUST00000185615 563 ntBASIC6.63□□□□□ -1.35
Shmt1P50431 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC6.63□□□□□ -1.35
Shmt1P50431 Gm5268-201ENSMUST00000189212 940 ntBASIC6.63□□□□□ -1.35
Shmt1P50431 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Shmt1P50431 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC6.63□□□□□ -1.35
Shmt1P50431 Gm3544-201ENSMUST00000196129 305 ntBASIC6.63□□□□□ -1.35
Shmt1P50431 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC6.63□□□□□ -1.35
Shmt1P50431 Gm30708-201ENSMUST00000202183 312 ntBASIC6.63□□□□□ -1.35
Shmt1P50431 Gm5306-201ENSMUST00000203325 757 ntBASIC6.63□□□□□ -1.35
Shmt1P50431 Gm44571-201ENSMUST00000208092 533 ntBASIC6.63□□□□□ -1.35
Shmt1P50431 Gm7499-201ENSMUST00000210423 813 ntBASIC6.63□□□□□ -1.35
Shmt1P50431 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Shmt1P50431 AC113305.1-201ENSMUST00000214664 724 ntBASIC6.63□□□□□ -1.35
Shmt1P50431 AC159476.1-201ENSMUST00000215914 1668 ntBASIC6.63□□□□□ -1.35
Shmt1P50431 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Shmt1P50431 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC6.63□□□□□ -1.35
Shmt1P50431 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC6.63□□□□□ -1.35
Shmt1P50431 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.63□□□□□ -1.35
Shmt1P50431 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC6.63□□□□□ -1.35
Shmt1P50431 AC134439.1-201ENSMUST00000220923 600 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 109.7 ms