Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm14869-201ENSMUST00000119007 884 ntBASIC7.94□□□□□ -1.14
Rfx1P48377 Gm9439-201ENSMUST00000119554 973 ntBASIC7.94□□□□□ -1.14
Rfx1P48377 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
Rfx1P48377 Gm11498-201ENSMUST00000120660 949 ntBASIC7.94□□□□□ -1.14
Rfx1P48377 Gm11581-201ENSMUST00000122024 763 ntBASIC7.94□□□□□ -1.14
Rfx1P48377 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC7.94□□□□□ -1.14
Rfx1P48377 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC7.94□□□□□ -1.14
Rfx1P48377 Gm22555-201ENSMUST00000157801 62 ntBASIC7.94□□□□□ -1.14
Rfx1P48377 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC7.94□□□□□ -1.14
Rfx1P48377 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC7.94□□□□□ -1.14
Rfx1P48377 Txn-ps1-201ENSMUST00000186385 309 ntBASIC7.94□□□□□ -1.14
Rfx1P48377 Gm17847-201ENSMUST00000188261 1127 ntBASIC7.94□□□□□ -1.14
Rfx1P48377 Gm21923-201ENSMUST00000188455 696 ntBASIC7.94□□□□□ -1.14
Rfx1P48377 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC7.94□□□□□ -1.14
Rfx1P48377 Gm38068-201ENSMUST00000192546 540 ntBASIC7.94□□□□□ -1.14
Rfx1P48377 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Rfx1P48377 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Rfx1P48377 Gm37555-201ENSMUST00000195711 542 ntTSL 5 BASIC7.94□□□□□ -1.14
Rfx1P48377 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC7.94□□□□□ -1.14
Rfx1P48377 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Rfx1P48377 Gm45658-201ENSMUST00000209197 580 ntBASIC7.94□□□□□ -1.14
Rfx1P48377 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC7.94□□□□□ -1.14
Rfx1P48377 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC7.94□□□□□ -1.14
Rfx1P48377 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC7.94□□□□□ -1.14
Rfx1P48377 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC7.94□□□□□ -1.14
Rfx1P48377 AC139941.1-201ENSMUST00000221517 478 ntBASIC7.94□□□□□ -1.14
Rfx1P48377 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC7.94□□□□□ -1.14
Rfx1P48377 AC125523.1-201ENSMUST00000228018 934 ntBASIC7.94□□□□□ -1.14
Rfx1P48377 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Rfx1P48377 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Rfx1P48377 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Rfx1P48377 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Rfx1P48377 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Rfx1P48377 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Rfx1P48377 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Rfx1P48377 Gm25403-201ENSMUST00000082971 143 ntBASIC7.94□□□□□ -1.14
Rfx1P48377 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
Rfx1P48377 Olfr934-203ENSMUST00000216823 2440 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Rfx1P48377 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Rfx1P48377 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC7.94□□□□□ -1.14
Rfx1P48377 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Rfx1P48377 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Rfx1P48377 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC7.94□□□□□ -1.14
Rfx1P48377 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Rfx1P48377 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
Rfx1P48377 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Rfx1P48377 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Rfx1P48377 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Rfx1P48377 Gm43961-201ENSMUST00000203289 1872 ntBASIC7.94□□□□□ -1.14
Rfx1P48377 AC158982.1-205ENSMUST00000227339 1876 ntBASIC7.94□□□□□ -1.14
Rfx1P48377 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Rfx1P48377 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC7.94□□□□□ -1.14
Rfx1P48377 AC169985.1-201ENSMUST00000223648 2439 ntBASIC7.93□□□□□ -1.14
Rfx1P48377 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Rfx1P48377 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Rfx1P48377 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC7.93□□□□□ -1.14
Rfx1P48377 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Rfx1P48377 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Rfx1P48377 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Rfx1P48377 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Rfx1P48377 Gm5383-201ENSMUST00000121177 617 ntBASIC7.93□□□□□ -1.14
Rfx1P48377 Gm13471-201ENSMUST00000122057 433 ntBASIC7.93□□□□□ -1.14
Rfx1P48377 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Rfx1P48377 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC7.93□□□□□ -1.14
Rfx1P48377 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC7.93□□□□□ -1.14
Rfx1P48377 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC7.93□□□□□ -1.14
Rfx1P48377 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Rfx1P48377 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Rfx1P48377 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Rfx1P48377 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC7.93□□□□□ -1.14
Rfx1P48377 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC7.93□□□□□ -1.14
Rfx1P48377 Gm8023-201ENSMUST00000195298 903 ntBASIC7.93□□□□□ -1.14
Rfx1P48377 Gm30613-201ENSMUST00000197277 512 ntTSL 3 BASIC7.93□□□□□ -1.14
Rfx1P48377 Gm30517-201ENSMUST00000197350 772 ntBASIC7.93□□□□□ -1.14
Rfx1P48377 Igkv13-82-201ENSMUST00000200308 346 ntBASIC7.93□□□□□ -1.14
Rfx1P48377 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC7.93□□□□□ -1.14
Rfx1P48377 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC7.93□□□□□ -1.14
Rfx1P48377 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Rfx1P48377 AC131710.2-201ENSMUST00000226773 683 ntBASIC7.93□□□□□ -1.14
Rfx1P48377 AC147628.1-201ENSMUST00000228193 688 ntBASIC7.93□□□□□ -1.14
Rfx1P48377 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Rfx1P48377 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Rfx1P48377 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Rfx1P48377 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC7.93□□□□□ -1.14
Rfx1P48377 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC7.93□□□□□ -1.14
Rfx1P48377 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Rfx1P48377 AC156163.1-201ENSMUST00000215598 3369 ntBASIC7.93□□□□□ -1.14
Rfx1P48377 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC7.93□□□□□ -1.14
Rfx1P48377 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Rfx1P48377 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Rfx1P48377 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Rfx1P48377 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Rfx1P48377 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Rfx1P48377 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Rfx1P48377 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
Rfx1P48377 Gm42998-201ENSMUST00000197053 2371 ntBASIC7.92□□□□□ -1.14
Rfx1P48377 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC7.92□□□□□ -1.14
Rfx1P48377 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC7.92□□□□□ -1.14
Rfx1P48377 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Rfx1P48377 Gm20749-201ENSMUST00000186319 3492 ntBASIC7.92□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 102.2 ms