Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Tnfsf4P43488 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC5.6□□□□□ -1.51
Tnfsf4P43488 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC5.6□□□□□ -1.51
Tnfsf4P43488 Gm42708-201ENSMUST00000196332 905 ntBASIC5.6□□□□□ -1.51
Tnfsf4P43488 Trav3n-2-201ENSMUST00000197693 334 ntBASIC5.6□□□□□ -1.51
Tnfsf4P43488 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Tnfsf4P43488 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.6□□□□□ -1.51
Tnfsf4P43488 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Tnfsf4P43488 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC5.6□□□□□ -1.51
Tnfsf4P43488 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC5.6□□□□□ -1.51
Tnfsf4P43488 Gm5055-201ENSMUST00000215697 581 ntBASIC5.6□□□□□ -1.51
Tnfsf4P43488 AC148328.2-201ENSMUST00000216960 262 ntBASIC5.6□□□□□ -1.51
Tnfsf4P43488 Gm3266-201ENSMUST00000217832 591 ntBASIC5.6□□□□□ -1.51
Tnfsf4P43488 AC151904.3-201ENSMUST00000219266 895 ntBASIC5.6□□□□□ -1.51
Tnfsf4P43488 Gm7413-201ENSMUST00000219498 462 ntBASIC5.6□□□□□ -1.51
Tnfsf4P43488 Gm9088-201ENSMUST00000220237 508 ntBASIC5.6□□□□□ -1.51
Tnfsf4P43488 CT485612.1-201ENSMUST00000222555 382 ntBASIC5.6□□□□□ -1.51
Tnfsf4P43488 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC5.6□□□□□ -1.51
Tnfsf4P43488 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.6□□□□□ -1.51
Tnfsf4P43488 AC122937.2-201ENSMUST00000228258 1051 ntBASIC5.6□□□□□ -1.51
Tnfsf4P43488 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.6□□□□□ -1.51
Tnfsf4P43488 Mir7b-201ENSMUST00000083557 111 ntBASIC5.6□□□□□ -1.51
Tnfsf4P43488 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.6□□□□□ -1.51
Tnfsf4P43488 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Tnfsf4P43488 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Tnfsf4P43488 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Tnfsf4P43488 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.6□□□□□ -1.51
Tnfsf4P43488 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Tnfsf4P43488 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Tnfsf4P43488 Gm21955-201ENSMUST00000194137 4968 ntBASIC5.59□□□□□ -1.51
Tnfsf4P43488 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Tnfsf4P43488 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Tnfsf4P43488 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.59□□□□□ -1.51
Tnfsf4P43488 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Tnfsf4P43488 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Tnfsf4P43488 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Tnfsf4P43488 AC156163.1-201ENSMUST00000215598 3369 ntBASIC5.59□□□□□ -1.51
Tnfsf4P43488 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Tnfsf4P43488 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Tnfsf4P43488 Gm25795-201ENSMUST00000104421 132 ntBASIC5.59□□□□□ -1.51
Tnfsf4P43488 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
Tnfsf4P43488 Gm12643-201ENSMUST00000116078 374 ntBASIC5.59□□□□□ -1.51
Tnfsf4P43488 Gm12939-201ENSMUST00000117303 165 ntBASIC5.59□□□□□ -1.51
Tnfsf4P43488 Gm12451-201ENSMUST00000121636 633 ntBASIC5.59□□□□□ -1.51
Tnfsf4P43488 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC5.59□□□□□ -1.51
Tnfsf4P43488 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Tnfsf4P43488 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC5.59□□□□□ -1.51
Tnfsf4P43488 Gm6264-201ENSMUST00000160802 624 ntBASIC5.59□□□□□ -1.51
Tnfsf4P43488 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC5.59□□□□□ -1.51
Tnfsf4P43488 Gm22642-201ENSMUST00000175352 252 ntBASIC5.59□□□□□ -1.51
Tnfsf4P43488 Gm26923-201ENSMUST00000182615 996 ntBASIC5.59□□□□□ -1.51
Tnfsf4P43488 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Tnfsf4P43488 Gm21654-201ENSMUST00000188086 691 ntBASIC5.59□□□□□ -1.51
Tnfsf4P43488 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Tnfsf4P43488 Gm38185-201ENSMUST00000193195 694 ntBASIC5.59□□□□□ -1.51
Tnfsf4P43488 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Tnfsf4P43488 Gm35013-201ENSMUST00000197218 832 ntBASIC5.59□□□□□ -1.51
Tnfsf4P43488 Gm19182-201ENSMUST00000207139 577 ntBASIC5.59□□□□□ -1.51
Tnfsf4P43488 Gm18205-201ENSMUST00000209215 841 ntBASIC5.59□□□□□ -1.51
Tnfsf4P43488 Gm8523-201ENSMUST00000211386 552 ntBASIC5.59□□□□□ -1.51
Tnfsf4P43488 Gm7570-201ENSMUST00000215246 698 ntBASIC5.59□□□□□ -1.51
Tnfsf4P43488 AC166105.1-201ENSMUST00000227512 482 ntBASIC5.59□□□□□ -1.51
Tnfsf4P43488 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.59□□□□□ -1.51
Tnfsf4P43488 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Tnfsf4P43488 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Tnfsf4P43488 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Tnfsf4P43488 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Tnfsf4P43488 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Tnfsf4P43488 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Tnfsf4P43488 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.59□□□□□ -1.51
Tnfsf4P43488 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Tnfsf4P43488 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.59□□□□□ -1.51
Tnfsf4P43488 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Tnfsf4P43488 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC5.59□□□□□ -1.52
Tnfsf4P43488 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Tnfsf4P43488 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.59□□□□□ -1.52
Tnfsf4P43488 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC5.59□□□□□ -1.52
Tnfsf4P43488 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Tnfsf4P43488 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Tnfsf4P43488 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Gm37060-201ENSMUST00000194997 2397 ntBASIC5.58□□□□□ -1.52
Tnfsf4P43488 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.58□□□□□ -1.52
Tnfsf4P43488 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.58□□□□□ -1.52
Tnfsf4P43488 AC155710.1-201ENSMUST00000219913 1353 ntBASIC5.58□□□□□ -1.52
Tnfsf4P43488 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.58□□□□□ -1.52
Tnfsf4P43488 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.58□□□□□ -1.52
Tnfsf4P43488 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Snora35-201ENSMUST00000104579 128 ntBASIC5.58□□□□□ -1.52
Tnfsf4P43488 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Gm13641-201ENSMUST00000117993 473 ntBASIC5.58□□□□□ -1.52
Tnfsf4P43488 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Gm12375-201ENSMUST00000119331 921 ntBASIC5.58□□□□□ -1.52
Tnfsf4P43488 Gm14970-201ENSMUST00000122289 355 ntBASIC5.58□□□□□ -1.52
Tnfsf4P43488 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Tnfsf4P43488 Gm22650-201ENSMUST00000175138 105 ntBASIC5.58□□□□□ -1.52
Tnfsf4P43488 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.58□□□□□ -1.52
Tnfsf4P43488 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms