Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Sdc2P43407 Gm14324-201ENSMUST00000121358 3051 ntBASIC6.48□□□□□ -1.37
Sdc2P43407 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Sdc2P43407 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.48□□□□□ -1.37
Sdc2P43407 Gm43258-201ENSMUST00000200312 1950 ntBASIC6.48□□□□□ -1.37
Sdc2P43407 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Sdc2P43407 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.47□□□□□ -1.37
Sdc2P43407 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sdc2P43407 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sdc2P43407 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Sdc2P43407 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Sdc2P43407 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Sdc2P43407 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.47□□□□□ -1.37
Sdc2P43407 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC6.47□□□□□ -1.37
Sdc2P43407 Gm24434-201ENSMUST00000104081 132 ntBASIC6.47□□□□□ -1.37
Sdc2P43407 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Sdc2P43407 Gm12077-201ENSMUST00000117049 364 ntBASIC6.47□□□□□ -1.37
Sdc2P43407 Gm7931-201ENSMUST00000121537 271 ntBASIC6.47□□□□□ -1.37
Sdc2P43407 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Sdc2P43407 Gm24741-201ENSMUST00000158857 106 ntBASIC6.47□□□□□ -1.37
Sdc2P43407 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sdc2P43407 n-R5s209-201ENSMUST00000179494 119 ntBASIC6.47□□□□□ -1.37
Sdc2P43407 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Sdc2P43407 Gm6631-201ENSMUST00000193699 559 ntBASIC6.47□□□□□ -1.37
Sdc2P43407 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC6.47□□□□□ -1.37
Sdc2P43407 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.47□□□□□ -1.37
Sdc2P43407 Gm18329-201ENSMUST00000215832 589 ntBASIC6.47□□□□□ -1.37
Sdc2P43407 AC154767.2-201ENSMUST00000224584 414 ntBASIC6.47□□□□□ -1.37
Sdc2P43407 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sdc2P43407 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sdc2P43407 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Sdc2P43407 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC6.47□□□□□ -1.37
Sdc2P43407 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Sdc2P43407 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sdc2P43407 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sdc2P43407 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Sdc2P43407 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
Sdc2P43407 Gm8853-201ENSMUST00000198366 1344 ntBASIC6.47□□□□□ -1.37
Sdc2P43407 Gm37127-201ENSMUST00000192924 3036 ntBASIC6.47□□□□□ -1.37
Sdc2P43407 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Sdc2P43407 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Sdc2P43407 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6.46□□□□□ -1.37
Sdc2P43407 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC6.46□□□□□ -1.37
Sdc2P43407 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Sdc2P43407 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC6.46□□□□□ -1.37
Sdc2P43407 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Sdc2P43407 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
Sdc2P43407 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC6.46□□□□□ -1.37
Sdc2P43407 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Sdc2P43407 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Sdc2P43407 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Sdc2P43407 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC6.46□□□□□ -1.38
Sdc2P43407 n-R5s172-201ENSMUST00000104508 114 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 Gm12713-201ENSMUST00000118404 764 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 Gm14783-201ENSMUST00000118900 663 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 Gm12488-201ENSMUST00000122449 499 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC6.46□□□□□ -1.38
Sdc2P43407 Gm26106-201ENSMUST00000157254 228 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 Gm24767-201ENSMUST00000158509 95 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Sdc2P43407 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 Rps12l1-201ENSMUST00000183090 399 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 Gm28586-201ENSMUST00000189857 456 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Sdc2P43407 Gm38177-201ENSMUST00000192213 1040 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
Sdc2P43407 Gm38137-201ENSMUST00000193735 1401 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Sdc2P43407 Gm44374-201ENSMUST00000199821 140 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 Gm43762-201ENSMUST00000201521 295 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Sdc2P43407 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Sdc2P43407 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC6.46□□□□□ -1.38
Sdc2P43407 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC6.46□□□□□ -1.38
Sdc2P43407 AC104906.1-201ENSMUST00000218122 913 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC6.46□□□□□ -1.38
Sdc2P43407 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.46□□□□□ -1.38
Sdc2P43407 Gm34165-201ENSMUST00000222012 1174 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 AC154633.1-201ENSMUST00000223276 449 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 AC154612.1-202ENSMUST00000224806 1725 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 CU062626.1-201ENSMUST00000225248 505 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 AC174678.3-201ENSMUST00000227568 362 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Sdc2P43407 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Sdc2P43407 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Sdc2P43407 Gm22351-201ENSMUST00000083925 107 ntBASIC6.46□□□□□ -1.38
Sdc2P43407 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Sdc2P43407 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC6.46□□□□□ -1.38
Sdc2P43407 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Sdc2P43407 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms