Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxc11P31313 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxc11P31313 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxc11P31313 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hoxc11P31313 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxc11P31313 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxc11P31313 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxc11P31313 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxc11P31313 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxc11P31313 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxc11P31313 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxc11P31313 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Gm38325-201ENSMUST00000194507 1377 ntBASIC6.11□□□□□ -1.43
Hoxc11P31313 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxc11P31313 Gm43781-201ENSMUST00000197634 2681 ntBASIC6.11□□□□□ -1.43
Hoxc11P31313 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxc11P31313 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Gm9429-201ENSMUST00000117804 868 ntBASIC6.11□□□□□ -1.43
Hoxc11P31313 Gm12442-201ENSMUST00000118372 338 ntBASIC6.11□□□□□ -1.43
Hoxc11P31313 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Gm6611-201ENSMUST00000163830 1272 ntBASIC6.11□□□□□ -1.43
Hoxc11P31313 Gm4831-201ENSMUST00000174626 594 ntBASIC6.11□□□□□ -1.43
Hoxc11P31313 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC6.11□□□□□ -1.43
Hoxc11P31313 Mir6337-201ENSMUST00000184194 105 ntBASIC6.11□□□□□ -1.43
Hoxc11P31313 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Gm29234-201ENSMUST00000187452 1262 ntBASIC6.11□□□□□ -1.43
Hoxc11P31313 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxc11P31313 Gm34768-201ENSMUST00000193884 565 ntBASIC6.11□□□□□ -1.43
Hoxc11P31313 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC6.11□□□□□ -1.43
Hoxc11P31313 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Gm7780-201ENSMUST00000214787 406 ntBASIC6.11□□□□□ -1.43
Hoxc11P31313 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Gm3266-201ENSMUST00000217832 591 ntBASIC6.11□□□□□ -1.43
Hoxc11P31313 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC6.11□□□□□ -1.43
Hoxc11P31313 AC154795.1-201ENSMUST00000225611 364 ntBASIC6.11□□□□□ -1.43
Hoxc11P31313 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.11□□□□□ -1.43
Hoxc11P31313 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxc11P31313 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxc11P31313 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxc11P31313 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxc11P31313 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxc11P31313 Gm37132-201ENSMUST00000195553 2238 ntBASIC6.11□□□□□ -1.43
Hoxc11P31313 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxc11P31313 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxc11P31313 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxc11P31313 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxc11P31313 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxc11P31313 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hoxc11P31313 Gm37569-201ENSMUST00000192111 1722 ntBASIC6.11□□□□□ -1.43
Hoxc11P31313 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Hoxc11P31313 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxc11P31313 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxc11P31313 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC6.1□□□□□ -1.43
Hoxc11P31313 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxc11P31313 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxc11P31313 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Hoxc11P31313 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Hoxc11P31313 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxc11P31313 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxc11P31313 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
Hoxc11P31313 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxc11P31313 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxc11P31313 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Hoxc11P31313 Gm24989-201ENSMUST00000104461 88 ntBASIC6.1□□□□□ -1.43
Hoxc11P31313 Gm16511-201ENSMUST00000120019 564 ntBASIC6.1□□□□□ -1.43
Hoxc11P31313 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.1□□□□□ -1.43
Hoxc11P31313 Gm6446-201ENSMUST00000120604 818 ntBASIC6.1□□□□□ -1.43
Hoxc11P31313 Gm12094-201ENSMUST00000121781 472 ntBASIC6.1□□□□□ -1.43
Hoxc11P31313 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hoxc11P31313 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.1□□□□□ -1.43
Hoxc11P31313 Gm24687-201ENSMUST00000157758 241 ntBASIC6.1□□□□□ -1.43
Hoxc11P31313 Gm24343-201ENSMUST00000158708 111 ntBASIC6.1□□□□□ -1.43
Hoxc11P31313 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Hoxc11P31313 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6.1□□□□□ -1.43
Hoxc11P31313 Gm21542-201ENSMUST00000182307 993 ntBASIC6.1□□□□□ -1.43
Hoxc11P31313 Mir6911-201ENSMUST00000184241 69 ntBASIC6.1□□□□□ -1.43
Hoxc11P31313 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC6.1□□□□□ -1.43
Hoxc11P31313 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms