Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC6.04□□□□□ -1.44
Lire1P11260 AL713985.1-201ENSMUST00000219030 420 ntBASIC6.04□□□□□ -1.44
Lire1P11260 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC6.04□□□□□ -1.44
Lire1P11260 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC6.04□□□□□ -1.44
Lire1P11260 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lire1P11260 Gm9472-201ENSMUST00000221625 526 ntBASIC6.04□□□□□ -1.44
Lire1P11260 Gm9315-201ENSMUST00000222696 908 ntBASIC6.04□□□□□ -1.44
Lire1P11260 AC105407.3-201ENSMUST00000224161 648 ntBASIC6.04□□□□□ -1.44
Lire1P11260 CT025523.1-201ENSMUST00000228318 694 ntBASIC6.04□□□□□ -1.44
Lire1P11260 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Lire1P11260 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Lire1P11260 Zfp865-202ENSMUST00000076791 1129 ntBASIC6.04□□□□□ -1.44
Lire1P11260 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.04□□□□□ -1.44
Lire1P11260 n-R5s27-201ENSMUST00000093699 119 ntBASIC6.04□□□□□ -1.44
Lire1P11260 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Lire1P11260 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Lire1P11260 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lire1P11260 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC6.04□□□□□ -1.44
Lire1P11260 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC6.04□□□□□ -1.44
Lire1P11260 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Lire1P11260 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Lire1P11260 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Lire1P11260 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Lire1P11260 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Lire1P11260 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC6.03□□□□□ -1.44
Lire1P11260 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lire1P11260 Gm44518-201ENSMUST00000208080 4370 ntBASIC6.03□□□□□ -1.44
Lire1P11260 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Lire1P11260 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC6.03□□□□□ -1.44
Lire1P11260 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Lire1P11260 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC6.03□□□□□ -1.44
Lire1P11260 Gm37289-201ENSMUST00000195409 1402 ntBASIC6.03□□□□□ -1.44
Lire1P11260 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Lire1P11260 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lire1P11260 Gm12439-201ENSMUST00000117162 365 ntBASIC6.03□□□□□ -1.44
Lire1P11260 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC6.03□□□□□ -1.44
Lire1P11260 Gm14755-201ENSMUST00000118037 384 ntBASIC6.03□□□□□ -1.44
Lire1P11260 Gm7658-201ENSMUST00000119064 1124 ntBASIC6.03□□□□□ -1.44
Lire1P11260 Gm14788-201ENSMUST00000119457 375 ntBASIC6.03□□□□□ -1.44
Lire1P11260 Gm12638-201ENSMUST00000119531 298 ntBASIC6.03□□□□□ -1.44
Lire1P11260 Gm11553-201ENSMUST00000120682 240 ntBASIC6.03□□□□□ -1.44
Lire1P11260 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.03□□□□□ -1.44
Lire1P11260 Gm6451-201ENSMUST00000121488 717 ntBASIC6.03□□□□□ -1.44
Lire1P11260 Gm13237-201ENSMUST00000122151 635 ntBASIC6.03□□□□□ -1.44
Lire1P11260 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Lire1P11260 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC6.03□□□□□ -1.44
Lire1P11260 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Lire1P11260 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Lire1P11260 Gm26352-201ENSMUST00000158223 125 ntBASIC6.03□□□□□ -1.44
Lire1P11260 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC6.03□□□□□ -1.44
Lire1P11260 Gm3140-201ENSMUST00000163523 481 ntBASIC6.03□□□□□ -1.44
Lire1P11260 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Lire1P11260 Gm28846-201ENSMUST00000189161 368 ntBASIC6.03□□□□□ -1.44
Lire1P11260 Gm7343-201ENSMUST00000194510 1061 ntBASIC6.03□□□□□ -1.44
Lire1P11260 Gm7463-201ENSMUST00000201541 547 ntBASIC6.03□□□□□ -1.44
Lire1P11260 Gm44111-201ENSMUST00000204649 399 ntBASIC6.03□□□□□ -1.44
Lire1P11260 Gm44690-201ENSMUST00000207984 382 ntBASIC6.03□□□□□ -1.44
Lire1P11260 Gm44845-201ENSMUST00000208773 335 ntBASIC6.03□□□□□ -1.44
Lire1P11260 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Lire1P11260 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Lire1P11260 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC6.03□□□□□ -1.44
Lire1P11260 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC6.03□□□□□ -1.44
Lire1P11260 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Lire1P11260 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.03□□□□□ -1.44
Lire1P11260 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
Lire1P11260 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lire1P11260 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lire1P11260 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lire1P11260 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lire1P11260 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Lire1P11260 AC121870.1-201ENSMUST00000216279 4879 ntBASIC6.03□□□□□ -1.44
Lire1P11260 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC6.03□□□□□ -1.44
Lire1P11260 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lire1P11260 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Lire1P11260 Gm43719-201ENSMUST00000200088 2199 ntBASIC6.03□□□□□ -1.44
Lire1P11260 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Lire1P11260 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Lire1P11260 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Lire1P11260 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Lire1P11260 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6.03□□□□□ -1.44
Lire1P11260 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
Lire1P11260 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
Lire1P11260 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Lire1P11260 Gm15425-201ENSMUST00000119013 2711 ntBASIC6.02□□□□□ -1.45
Lire1P11260 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Lire1P11260 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Lire1P11260 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC6.02□□□□□ -1.45
Lire1P11260 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Lire1P11260 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.02□□□□□ -1.45
Lire1P11260 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Lire1P11260 Gm7058-201ENSMUST00000119209 902 ntBASIC6.02□□□□□ -1.45
Lire1P11260 Gm15311-201ENSMUST00000119682 282 ntBASIC6.02□□□□□ -1.45
Lire1P11260 Gm14655-201ENSMUST00000120124 578 ntBASIC6.02□□□□□ -1.45
Lire1P11260 Gm15305-201ENSMUST00000120354 288 ntBASIC6.02□□□□□ -1.45
Lire1P11260 Gm15712-201ENSMUST00000120369 1156 ntBASIC6.02□□□□□ -1.45
Lire1P11260 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Lire1P11260 Gm12833-201ENSMUST00000136112 477 ntBASIC6.02□□□□□ -1.45
Lire1P11260 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Lire1P11260 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Lire1P11260 Ms4a2-202ENSMUST00000164792 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms