Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col1a1P11087 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col1a1P11087 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Col1a1P11087 Gm8141-201ENSMUST00000190856 1723 ntBASIC6.95□□□□□ -1.3
Col1a1P11087 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC6.95□□□□□ -1.3
Col1a1P11087 Gm25422-201ENSMUST00000104219 129 ntBASIC6.95□□□□□ -1.3
Col1a1P11087 Gm14175-201ENSMUST00000119835 241 ntBASIC6.95□□□□□ -1.3
Col1a1P11087 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col1a1P11087 Gm23546-201ENSMUST00000158211 137 ntBASIC6.95□□□□□ -1.3
Col1a1P11087 Mir6417-201ENSMUST00000183815 116 ntBASIC6.95□□□□□ -1.3
Col1a1P11087 Gm2950-201ENSMUST00000185530 520 ntBASIC6.95□□□□□ -1.3
Col1a1P11087 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC6.95□□□□□ -1.3
Col1a1P11087 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC6.95□□□□□ -1.3
Col1a1P11087 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.95□□□□□ -1.3
Col1a1P11087 Gm19256-201ENSMUST00000218550 231 ntBASIC6.95□□□□□ -1.3
Col1a1P11087 AC192088.3-201ENSMUST00000227858 831 ntBASIC6.95□□□□□ -1.3
Col1a1P11087 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col1a1P11087 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC6.95□□□□□ -1.3
Col1a1P11087 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col1a1P11087 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Col1a1P11087 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.95□□□□□ -1.3
Col1a1P11087 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.95□□□□□ -1.3
Col1a1P11087 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC6.95□□□□□ -1.3
Col1a1P11087 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col1a1P11087 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col1a1P11087 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Col1a1P11087 AC151984.1-201ENSMUST00000218261 2976 ntBASIC6.95□□□□□ -1.3
Col1a1P11087 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Col1a1P11087 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col1a1P11087 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col1a1P11087 Gm38224-201ENSMUST00000191648 2100 ntBASIC6.94□□□□□ -1.3
Col1a1P11087 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC6.94□□□□□ -1.3
Col1a1P11087 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Col1a1P11087 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC6.94□□□□□ -1.3
Col1a1P11087 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Col1a1P11087 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Col1a1P11087 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
Col1a1P11087 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Col1a1P11087 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Col1a1P11087 Gm6134-201ENSMUST00000117265 171 ntBASIC6.94□□□□□ -1.3
Col1a1P11087 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col1a1P11087 Gm13259-201ENSMUST00000120792 456 ntBASIC6.94□□□□□ -1.3
Col1a1P11087 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.94□□□□□ -1.3
Col1a1P11087 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col1a1P11087 Gm24692-201ENSMUST00000157761 146 ntBASIC6.94□□□□□ -1.3
Col1a1P11087 Gm23774-201ENSMUST00000158990 131 ntBASIC6.94□□□□□ -1.3
Col1a1P11087 Gm8185-201ENSMUST00000160999 669 ntBASIC6.94□□□□□ -1.3
Col1a1P11087 Mir6539-201ENSMUST00000183732 110 ntBASIC6.94□□□□□ -1.3
Col1a1P11087 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col1a1P11087 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC6.94□□□□□ -1.3
Col1a1P11087 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Col1a1P11087 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col1a1P11087 Gm45525-201ENSMUST00000210800 389 ntBASIC6.94□□□□□ -1.3
Col1a1P11087 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC6.94□□□□□ -1.3
Col1a1P11087 Gm19169-201ENSMUST00000220109 1246 ntBASIC6.94□□□□□ -1.3
Col1a1P11087 AC154417.1-201ENSMUST00000223876 476 ntBASIC6.94□□□□□ -1.3
Col1a1P11087 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Col1a1P11087 AC107757.1-201ENSMUST00000226780 357 ntBASIC6.94□□□□□ -1.3
Col1a1P11087 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col1a1P11087 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col1a1P11087 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC6.94□□□□□ -1.3
Col1a1P11087 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col1a1P11087 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col1a1P11087 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col1a1P11087 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col1a1P11087 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col1a1P11087 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col1a1P11087 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col1a1P11087 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col1a1P11087 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Col1a1P11087 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col1a1P11087 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Col1a1P11087 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC6.94□□□□□ -1.3
Col1a1P11087 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Col1a1P11087 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Col1a1P11087 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Col1a1P11087 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC6.93□□□□□ -1.3
Col1a1P11087 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC6.93□□□□□ -1.3
Col1a1P11087 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col1a1P11087 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC6.93□□□□□ -1.3
Col1a1P11087 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col1a1P11087 Gm37090-201ENSMUST00000195694 4105 ntBASIC6.93□□□□□ -1.3
Col1a1P11087 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC6.93□□□□□ -1.3
Col1a1P11087 Gm6427-201ENSMUST00000118721 979 ntBASIC6.93□□□□□ -1.3
Col1a1P11087 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col1a1P11087 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col1a1P11087 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC6.93□□□□□ -1.3
Col1a1P11087 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC6.93□□□□□ -1.3
Col1a1P11087 Gm25227-201ENSMUST00000158204 112 ntBASIC6.93□□□□□ -1.3
Col1a1P11087 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC6.93□□□□□ -1.3
Col1a1P11087 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Col1a1P11087 Mir6343-201ENSMUST00000183584 84 ntBASIC6.93□□□□□ -1.3
Col1a1P11087 Gm8669-201ENSMUST00000183839 945 ntBASIC6.93□□□□□ -1.3
Col1a1P11087 Gm29284-201ENSMUST00000188363 255 ntBASIC6.93□□□□□ -1.3
Col1a1P11087 Gm18800-202ENSMUST00000188688 1105 ntBASIC6.93□□□□□ -1.3
Col1a1P11087 Gm28443-201ENSMUST00000189081 698 ntBASIC6.93□□□□□ -1.3
Col1a1P11087 Gm38291-201ENSMUST00000193671 259 ntBASIC6.93□□□□□ -1.3
Col1a1P11087 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC6.93□□□□□ -1.3
Col1a1P11087 Gm43631-201ENSMUST00000202011 369 ntBASIC6.93□□□□□ -1.3
Col1a1P11087 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms