Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm13586-201ENSMUST00000121784 464 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm11688-201ENSMUST00000122145 308 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm15075-201ENSMUST00000122187 477 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxd3P09027 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxd3P09027 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm25277-201ENSMUST00000157266 324 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Mir1968-201ENSMUST00000157429 68 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm22216-201ENSMUST00000157557 114 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm22670-201ENSMUST00000158724 143 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm20701-201ENSMUST00000176082 347 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm24757-201ENSMUST00000176987 371 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm18700-201ENSMUST00000185791 553 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm5541-201ENSMUST00000193248 1113 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm32175-201ENSMUST00000193641 346 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm38234-201ENSMUST00000195204 421 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm42437-201ENSMUST00000197263 923 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm9173-201ENSMUST00000198054 400 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm43762-201ENSMUST00000201521 295 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm19252-201ENSMUST00000204705 305 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC6.09□□□□□ -1.43
Hoxd3P09027 AC154760.1-201ENSMUST00000227218 673 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 AC163646.1-201ENSMUST00000227704 397 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 AC117588.2-201ENSMUST00000228340 311 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm5815-201ENSMUST00000050706 1185 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxd3P09027 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Hoxd3P09027 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Hoxd3P09027 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm24046-201ENSMUST00000083111 165 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm17199-201ENSMUST00000097296 416 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 AC171003.1-201ENSMUST00000221667 1665 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxd3P09027 Gm37199-201ENSMUST00000193881 4065 ntBASIC6.09□□□□□ -1.43
Hoxd3P09027 Kbtbd4-201ENSMUST00000090682 2437 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxd3P09027 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC6.09□□□□□ -1.43
Hoxd3P09027 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxd3P09027 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxd3P09027 Eif4a2-202ENSMUST00000077605 2708 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxd3P09027 Hipk2-207ENSMUST00000162359 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Hoxd3P09027 Ezh1-202ENSMUST00000107284 4207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Hoxd3P09027 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Hoxd3P09027 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Hoxd3P09027 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
Hoxd3P09027 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Hoxd3P09027 Gm37474-201ENSMUST00000194812 1814 ntBASIC6.09□□□□□ -1.44
Hoxd3P09027 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxd3P09027 Zfp758-204ENSMUST00000149699 2876 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Hoxd3P09027 Hpd-201ENSMUST00000031398 1404 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxd3P09027 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Hoxd3P09027 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC6.08□□□□□ -1.44
Hoxd3P09027 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Kcnma1-206ENSMUST00000163322 3162 ntTSL 5 BASIC6.08□□□□□ -1.44
Hoxd3P09027 Kcnma1-210ENSMUST00000179836 3177 ntTSL 5 BASIC6.08□□□□□ -1.44
Hoxd3P09027 A830036E02Rik-202ENSMUST00000128904 2768 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
Hoxd3P09027 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxd3P09027 Adgrd1-203ENSMUST00000156437 4141 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxd3P09027 Ap3m2-204ENSMUST00000210656 3373 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxd3P09027 4921509C19Rik-201ENSMUST00000080132 2684 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxd3P09027 Meis1-209ENSMUST00000185131 3346 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxd3P09027 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxd3P09027 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
Hoxd3P09027 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm14226-201ENSMUST00000130870 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxd3P09027 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm14987-201ENSMUST00000117820 676 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm4918-201ENSMUST00000119420 1084 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm12993-201ENSMUST00000119900 479 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm16407-201ENSMUST00000122134 567 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC6.08□□□□□ -1.44
Hoxd3P09027 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC6.08□□□□□ -1.44
Hoxd3P09027 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm23079-201ENSMUST00000157847 117 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm3091-201ENSMUST00000163408 484 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm3208-201ENSMUST00000168281 427 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC6.08□□□□□ -1.44
Hoxd3P09027 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm6100-201ENSMUST00000180253 403 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm17929-201ENSMUST00000186851 627 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm29144-201ENSMUST00000189235 339 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm29238-201ENSMUST00000189709 695 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm28607-201ENSMUST00000190142 339 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm28121-201ENSMUST00000191420 339 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC6.08□□□□□ -1.44
Hoxd3P09027 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC6.08□□□□□ -1.44
Hoxd3P09027 Gm42161-201ENSMUST00000196278 726 ntTSL 5 BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms