Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC4.76□□□□□ -1.65
Hmgb3O54879 CT030238.4-202ENSMUST00000226143 745 ntBASIC4.76□□□□□ -1.65
Hmgb3O54879 AC158982.1-205ENSMUST00000227339 1876 ntBASIC4.76□□□□□ -1.65
Hmgb3O54879 CT025686.1-201ENSMUST00000227592 438 ntBASIC4.76□□□□□ -1.65
Hmgb3O54879 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Hmgb3O54879 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
Hmgb3O54879 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
Hmgb3O54879 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Hmgb3O54879 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
Hmgb3O54879 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
Hmgb3O54879 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Hmgb3O54879 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Hmgb3O54879 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Hmgb3O54879 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm42496-201ENSMUST00000197976 3241 ntBASIC4.76□□□□□ -1.65
Hmgb3O54879 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Hmgb3O54879 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC4.76□□□□□ -1.65
Hmgb3O54879 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Hmgb3O54879 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Hmgb3O54879 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Hmgb3O54879 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Hmgb3O54879 Gm37880-201ENSMUST00000192216 3257 ntBASIC4.75□□□□□ -1.65
Hmgb3O54879 AC151971.5-201ENSMUST00000214422 3254 ntBASIC4.75□□□□□ -1.65
Hmgb3O54879 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Hmgb3O54879 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Hmgb3O54879 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC4.75□□□□□ -1.65
Hmgb3O54879 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Hmgb3O54879 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC4.75□□□□□ -1.65
Hmgb3O54879 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Hmgb3O54879 Gm12573-201ENSMUST00000118158 286 ntBASIC4.75□□□□□ -1.65
Hmgb3O54879 Gm14267-201ENSMUST00000119751 496 ntBASIC4.75□□□□□ -1.65
Hmgb3O54879 Gm12189-201ENSMUST00000119779 912 ntBASIC4.75□□□□□ -1.65
Hmgb3O54879 Gm12451-201ENSMUST00000121636 633 ntBASIC4.75□□□□□ -1.65
Hmgb3O54879 Gm15840-201ENSMUST00000122099 943 ntBASIC4.75□□□□□ -1.65
Hmgb3O54879 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Hmgb3O54879 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC4.75□□□□□ -1.65
Hmgb3O54879 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC4.75□□□□□ -1.65
Hmgb3O54879 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC4.75□□□□□ -1.65
Hmgb3O54879 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC4.75□□□□□ -1.65
Hmgb3O54879 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Hmgb3O54879 Gm25770-201ENSMUST00000158566 115 ntBASIC4.75□□□□□ -1.65
Hmgb3O54879 Gm7289-201ENSMUST00000168993 734 ntBASIC4.75□□□□□ -1.65
Hmgb3O54879 Gm26959-201ENSMUST00000182376 978 ntBASIC4.75□□□□□ -1.65
Hmgb3O54879 Gm28885-201ENSMUST00000185615 563 ntBASIC4.75□□□□□ -1.65
Hmgb3O54879 Stk-ps2-204ENSMUST00000187808 616 ntBASIC4.75□□□□□ -1.65
Hmgb3O54879 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Hmgb3O54879 Gm18407-201ENSMUST00000192126 790 ntBASIC4.75□□□□□ -1.65
Hmgb3O54879 Gm2229-201ENSMUST00000193328 710 ntBASIC4.75□□□□□ -1.65
Hmgb3O54879 Gm6119-201ENSMUST00000193443 1206 ntBASIC4.75□□□□□ -1.65
Hmgb3O54879 Gm37774-201ENSMUST00000194401 245 ntBASIC4.75□□□□□ -1.65
Hmgb3O54879 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Hmgb3O54879 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC4.75□□□□□ -1.65
Hmgb3O54879 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC4.75□□□□□ -1.65
Hmgb3O54879 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Hmgb3O54879 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC4.75□□□□□ -1.65
Hmgb3O54879 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC4.75□□□□□ -1.65
Hmgb3O54879 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Hmgb3O54879 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Hmgb3O54879 AC131117.2-202ENSMUST00000224539 547 ntBASIC4.75□□□□□ -1.65
Hmgb3O54879 AC129017.2-201ENSMUST00000226118 1284 ntBASIC4.75□□□□□ -1.65
Hmgb3O54879 AC164302.1-201ENSMUST00000227036 433 ntBASIC4.75□□□□□ -1.65
Hmgb3O54879 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Hmgb3O54879 Gpr87-201ENSMUST00000056898 1080 ntBASIC4.75□□□□□ -1.65
Hmgb3O54879 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Hmgb3O54879 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Hmgb3O54879 n-R5s95-201ENSMUST00000082684 118 ntBASIC4.75□□□□□ -1.65
Hmgb3O54879 AC152944.1-201ENSMUST00000220160 3101 ntBASIC4.75□□□□□ -1.65
Hmgb3O54879 Gm9521-201ENSMUST00000206656 1516 ntBASIC4.75□□□□□ -1.65
Hmgb3O54879 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Hmgb3O54879 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Hmgb3O54879 Slco6b1-202ENSMUST00000178359 1778 ntBASIC4.75□□□□□ -1.65
Hmgb3O54879 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Hmgb3O54879 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Hmgb3O54879 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
Hmgb3O54879 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Hmgb3O54879 AC192616.2-201ENSMUST00000221482 3841 ntBASIC4.74□□□□□ -1.65
Hmgb3O54879 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Hmgb3O54879 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Hmgb3O54879 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Hmgb3O54879 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Hmgb3O54879 Gm18880-201ENSMUST00000223333 1541 ntBASIC4.74□□□□□ -1.65
Hmgb3O54879 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Hmgb3O54879 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Hmgb3O54879 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Hmgb3O54879 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Hmgb3O54879 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Hmgb3O54879 Gm12683-201ENSMUST00000117528 415 ntBASIC4.74□□□□□ -1.65
Hmgb3O54879 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Hmgb3O54879 Gm12175-201ENSMUST00000122081 345 ntBASIC4.74□□□□□ -1.65
Hmgb3O54879 Gm11434-201ENSMUST00000122379 629 ntBASIC4.74□□□□□ -1.65
Hmgb3O54879 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC4.74□□□□□ -1.65
Hmgb3O54879 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Hmgb3O54879 Gm20480-201ENSMUST00000173953 250 ntBASIC4.74□□□□□ -1.65
Hmgb3O54879 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Hmgb3O54879 Gm43664-201ENSMUST00000196038 734 ntBASIC4.74□□□□□ -1.65
Hmgb3O54879 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Hmgb3O54879 Gm4860-201ENSMUST00000200368 454 ntBASIC4.74□□□□□ -1.65
Hmgb3O54879 Gm42558-201ENSMUST00000200982 265 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms