Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Mir7084-201ENSMUST00000183876 70 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm29598-201ENSMUST00000188996 588 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm20885-201ENSMUST00000190192 654 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm28070-201ENSMUST00000191502 445 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm29740-201ENSMUST00000193182 655 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm36866-201ENSMUST00000193343 657 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm36047-201ENSMUST00000193659 657 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm20857-201ENSMUST00000194766 657 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm20858-201ENSMUST00000195459 657 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm18410-201ENSMUST00000207199 577 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm44984-201ENSMUST00000207802 394 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 AC160338.3-201ENSMUST00000214836 384 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 AC130823.2-201ENSMUST00000226169 290 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 CT030662.3-201ENSMUST00000228751 476 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 AC158981.3-202ENSMUST00000228906 523 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.09□□□□□ -1.43
Pcdh1F7BJK1 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Pcdh1F7BJK1 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Pcdh1F7BJK1 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.09□□□□□ -1.44
Pcdh1F7BJK1 Gm43029-201ENSMUST00000201829 1535 ntBASIC6.09□□□□□ -1.44
Pcdh1F7BJK1 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
Pcdh1F7BJK1 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.09□□□□□ -1.44
Pcdh1F7BJK1 AC151904.1-201ENSMUST00000219945 1498 ntBASIC6.09□□□□□ -1.44
Pcdh1F7BJK1 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.44
Pcdh1F7BJK1 Gm43502-201ENSMUST00000200263 2596 ntBASIC6.09□□□□□ -1.44
Pcdh1F7BJK1 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Gm10601-201ENSMUST00000120436 1422 ntBASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Gm42905-201ENSMUST00000196237 1611 ntBASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Gm13222-201ENSMUST00000119638 138 ntBASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Gm11338-201ENSMUST00000120086 1160 ntBASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Gm15362-201ENSMUST00000121459 388 ntBASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Gm11385-201ENSMUST00000121513 570 ntBASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Klra11-ps-201ENSMUST00000122033 810 ntBASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Gm24647-201ENSMUST00000157112 113 ntBASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Gm25717-201ENSMUST00000158631 353 ntBASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Gm24735-201ENSMUST00000158859 118 ntBASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Gm23186-201ENSMUST00000180078 107 ntBASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Gm5787-201ENSMUST00000183049 1038 ntBASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Gm27617-201ENSMUST00000184321 168 ntBASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Gm28149-201ENSMUST00000187102 378 ntBASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Gm29534-201ENSMUST00000187328 382 ntBASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Gm28768-201ENSMUST00000189034 378 ntBASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Gm44003-201ENSMUST00000203024 490 ntBASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Pcdh1F7BJK1 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 117.6 ms