Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC6.14□□□□□ -1.43
Scn1aA2APX8 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC6.14□□□□□ -1.43
Scn1aA2APX8 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn1aA2APX8 AC153937.1-201ENSMUST00000218734 412 ntBASIC6.14□□□□□ -1.43
Scn1aA2APX8 AC154556.1-201ENSMUST00000224587 885 ntBASIC6.14□□□□□ -1.43
Scn1aA2APX8 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Scn1aA2APX8 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn1aA2APX8 Gm7887-201ENSMUST00000056948 537 ntBASIC6.14□□□□□ -1.43
Scn1aA2APX8 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn1aA2APX8 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Scn1aA2APX8 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn1aA2APX8 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Scn1aA2APX8 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.14□□□□□ -1.43
Scn1aA2APX8 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Scn1aA2APX8 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn1aA2APX8 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Scn1aA2APX8 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn1aA2APX8 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn1aA2APX8 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.13□□□□□ -1.43
Scn1aA2APX8 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1aA2APX8 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Scn1aA2APX8 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Scn1aA2APX8 Gm24886-201ENSMUST00000104384 123 ntBASIC6.13□□□□□ -1.43
Scn1aA2APX8 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC6.13□□□□□ -1.43
Scn1aA2APX8 Gm7189-201ENSMUST00000119811 429 ntBASIC6.13□□□□□ -1.43
Scn1aA2APX8 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC6.13□□□□□ -1.43
Scn1aA2APX8 Gm15335-201ENSMUST00000122442 411 ntBASIC6.13□□□□□ -1.43
Scn1aA2APX8 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Scn1aA2APX8 Gm17142-201ENSMUST00000164933 645 ntBASIC6.13□□□□□ -1.43
Scn1aA2APX8 Ighv3-2-201ENSMUST00000191842 349 ntBASIC6.13□□□□□ -1.43
Scn1aA2APX8 Gm38122-201ENSMUST00000192679 885 ntBASIC6.13□□□□□ -1.43
Scn1aA2APX8 Gm36939-201ENSMUST00000194889 439 ntBASIC6.13□□□□□ -1.43
Scn1aA2APX8 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC6.13□□□□□ -1.43
Scn1aA2APX8 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC6.13□□□□□ -1.43
Scn1aA2APX8 Gm31211-201ENSMUST00000199170 253 ntBASIC6.13□□□□□ -1.43
Scn1aA2APX8 Gm43054-201ENSMUST00000199495 884 ntBASIC6.13□□□□□ -1.43
Scn1aA2APX8 Mir219c-201ENSMUST00000199860 60 ntBASIC6.13□□□□□ -1.43
Scn1aA2APX8 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1aA2APX8 n-R5s65-201ENSMUST00000082614 117 ntBASIC6.13□□□□□ -1.43
Scn1aA2APX8 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1aA2APX8 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1aA2APX8 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1aA2APX8 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1aA2APX8 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.13□□□□□ -1.43
Scn1aA2APX8 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1aA2APX8 Gm43343-201ENSMUST00000202454 1926 ntBASIC6.13□□□□□ -1.43
Scn1aA2APX8 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Scn1aA2APX8 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1aA2APX8 Gm10743-201ENSMUST00000219611 2358 ntBASIC6.13□□□□□ -1.43
Scn1aA2APX8 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1aA2APX8 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Scn1aA2APX8 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1aA2APX8 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC6.13□□□□□ -1.43
Scn1aA2APX8 Gm43488-201ENSMUST00000198874 2504 ntBASIC6.13□□□□□ -1.43
Scn1aA2APX8 Gm21122-201ENSMUST00000191548 3452 ntBASIC6.13□□□□□ -1.43
Scn1aA2APX8 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Scn1aA2APX8 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Scn1aA2APX8 Gm12322-201ENSMUST00000121605 389 ntBASIC6.13□□□□□ -1.43
Scn1aA2APX8 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1aA2APX8 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC6.13□□□□□ -1.43
Scn1aA2APX8 Gm25152-201ENSMUST00000157117 114 ntBASIC6.13□□□□□ -1.43
Scn1aA2APX8 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1aA2APX8 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC6.13□□□□□ -1.43
Scn1aA2APX8 Gm8930-201ENSMUST00000201693 768 ntBASIC6.13□□□□□ -1.43
Scn1aA2APX8 Gm43456-201ENSMUST00000202519 457 ntBASIC6.13□□□□□ -1.43
Scn1aA2APX8 Gm44221-201ENSMUST00000203552 388 ntBASIC6.13□□□□□ -1.43
Scn1aA2APX8 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.13□□□□□ -1.43
Scn1aA2APX8 Gm9894-201ENSMUST00000171257 2904 ntBASIC6.13□□□□□ -1.43
Scn1aA2APX8 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn1aA2APX8 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC6.13□□□□□ -1.43
Scn1aA2APX8 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1aA2APX8 AC159308.1-201ENSMUST00000216615 1351 ntBASIC6.12□□□□□ -1.43
Scn1aA2APX8 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1aA2APX8 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1aA2APX8 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1aA2APX8 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Scn1aA2APX8 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Scn1aA2APX8 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1aA2APX8 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC6.12□□□□□ -1.43
Scn1aA2APX8 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.12□□□□□ -1.43
Scn1aA2APX8 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1aA2APX8 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Scn1aA2APX8 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC6.12□□□□□ -1.43
Scn1aA2APX8 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC6.12□□□□□ -1.43
Scn1aA2APX8 Gm1972-201ENSMUST00000181606 964 ntBASIC6.12□□□□□ -1.43
Scn1aA2APX8 Mir7037-201ENSMUST00000184414 65 ntBASIC6.12□□□□□ -1.43
Scn1aA2APX8 Gm8419-201ENSMUST00000189886 412 ntBASIC6.12□□□□□ -1.43
Scn1aA2APX8 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.12□□□□□ -1.43
Scn1aA2APX8 Gm42522-201ENSMUST00000196071 255 ntBASIC6.12□□□□□ -1.43
Scn1aA2APX8 Gm43215-201ENSMUST00000199108 252 ntBASIC6.12□□□□□ -1.43
Scn1aA2APX8 Gm6702-201ENSMUST00000208496 471 ntBASIC6.12□□□□□ -1.43
Scn1aA2APX8 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1aA2APX8 AC122858.1-201ENSMUST00000226212 433 ntBASIC6.12□□□□□ -1.43
Scn1aA2APX8 AC122858.3-201ENSMUST00000226341 740 ntBASIC6.12□□□□□ -1.43
Scn1aA2APX8 AC122858.1-202ENSMUST00000228290 986 ntBASIC6.12□□□□□ -1.43
Scn1aA2APX8 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1aA2APX8 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1aA2APX8 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1aA2APX8 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Scn1aA2APX8 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms