Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Gm42507-201ENSMUST00000201187 2555 ntBASIC5.69□□□□□ -1.5
Trim3Q9R1R2 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Gm24709-201ENSMUST00000104123 132 ntBASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Gm14580-201ENSMUST00000119122 718 ntBASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Gm17137-202ENSMUST00000165729 957 ntBASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Gm17048-201ENSMUST00000179266 847 ntBASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Gm43744-201ENSMUST00000196387 688 ntBASIC5.69□□□□□ -1.5
Trim3Q9R1R2 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Gm5306-201ENSMUST00000203325 757 ntBASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Gm44582-201ENSMUST00000209125 445 ntBASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Gm45473-201ENSMUST00000211452 616 ntBASIC5.69□□□□□ -1.5
Trim3Q9R1R2 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 AC163743.1-201ENSMUST00000224309 270 ntBASIC5.69□□□□□ -1.5
Trim3Q9R1R2 AC154795.1-201ENSMUST00000225611 364 ntBASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Gm43611-201ENSMUST00000196656 4352 ntBASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Gm43503-201ENSMUST00000200033 3408 ntBASIC5.69□□□□□ -1.5
Trim3Q9R1R2 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Gm44697-201ENSMUST00000207756 1679 ntBASIC5.69□□□□□ -1.5
Trim3Q9R1R2 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Trim3Q9R1R2 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 AC123629.1-201ENSMUST00000225669 1364 ntBASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.68□□□□□ -1.5
Trim3Q9R1R2 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 CT009757.5-201ENSMUST00000221858 3425 ntBASIC5.68□□□□□ -1.5
Trim3Q9R1R2 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Gm44043-201ENSMUST00000203426 3253 ntBASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Gm22374-201ENSMUST00000104583 132 ntBASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Gm14772-201ENSMUST00000116562 514 ntBASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Gm13193-201ENSMUST00000117275 225 ntBASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Gm13818-201ENSMUST00000119441 511 ntBASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Gm9005-201ENSMUST00000119908 607 ntBASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Gm13578-201ENSMUST00000120849 590 ntBASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Gm25387-201ENSMUST00000157813 132 ntBASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Gm37604-201ENSMUST00000191749 1272 ntBASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Gm38217-201ENSMUST00000194358 910 ntBASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Gm9057-201ENSMUST00000198791 296 ntBASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Gm18290-201ENSMUST00000202900 844 ntBASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC5.68□□□□□ -1.5
Trim3Q9R1R2 AC165292.1-201ENSMUST00000215218 620 ntBASIC5.68□□□□□ -1.5
Trim3Q9R1R2 AC126685.1-201ENSMUST00000221001 121 ntBASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC5.68□□□□□ -1.5
Trim3Q9R1R2 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 112 ms