Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm8430-201ENSMUST00000119780 471 ntBASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Gm18808-201ENSMUST00000173316 462 ntBASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Gm23631-201ENSMUST00000175291 123 ntBASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Gm18352-201ENSMUST00000189113 902 ntBASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Gm38177-201ENSMUST00000192213 1040 ntBASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Gm18427-201ENSMUST00000195422 515 ntBASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Gm7492-201ENSMUST00000201745 725 ntBASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Gm18290-201ENSMUST00000202900 844 ntBASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Gm18689-201ENSMUST00000203969 902 ntBASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Lima1Q9ERG0 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
Lima1Q9ERG0 CT025686.1-201ENSMUST00000227592 438 ntBASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.8□□□□□ -1.48
Lima1Q9ERG0 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Lima1Q9ERG0 AC174459.1-201ENSMUST00000224476 1943 ntBASIC5.8□□□□□ -1.48
Lima1Q9ERG0 AC163032.1-201ENSMUST00000220671 2970 ntBASIC5.79□□□□□ -1.48
Lima1Q9ERG0 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Gm22714-201ENSMUST00000116894 78 ntBASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Gm11256-201ENSMUST00000118109 829 ntBASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Gm21877-201ENSMUST00000185640 694 ntBASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Gm5260-201ENSMUST00000186157 949 ntBASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Gm28918-201ENSMUST00000188822 699 ntBASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Gm45246-201ENSMUST00000210820 367 ntBASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Gm4032-201ENSMUST00000210886 487 ntBASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Gm19212-201ENSMUST00000216642 862 ntBASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 AC154646.1-201ENSMUST00000225011 1092 ntBASIC5.79□□□□□ -1.48
Lima1Q9ERG0 AC122459.2-201ENSMUST00000227099 638 ntBASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Gm24032-201ENSMUST00000083932 159 ntBASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Lima1Q9ERG0 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Gm11271-201ENSMUST00000116054 440 ntBASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Gm12653-201ENSMUST00000117778 561 ntBASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Gm13702-201ENSMUST00000118542 825 ntBASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Gm12099-201ENSMUST00000118660 750 ntBASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Gm12677-201ENSMUST00000118668 426 ntBASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Gm11227-201ENSMUST00000119774 471 ntBASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Gm14331-201ENSMUST00000120396 409 ntBASIC5.78□□□□□ -1.48
Lima1Q9ERG0 Gm12451-201ENSMUST00000121636 633 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 97.9 ms