Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm9529-201ENSMUST00000177598 579 ntBASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Mir7020-201ENSMUST00000183787 70 ntBASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Gm3321-201ENSMUST00000200603 1129 ntBASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Gm31861-201ENSMUST00000204563 672 ntBASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Gm33178-201ENSMUST00000212090 257 ntBASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Gm7570-201ENSMUST00000215246 698 ntBASIC6.79□□□□□ -1.32
Smc1aQ9CU62 AC155941.1-201ENSMUST00000220223 529 ntBASIC6.79□□□□□ -1.32
Smc1aQ9CU62 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Gm9788-201ENSMUST00000057038 906 ntBASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Smc1aQ9CU62 AC140393.3-201ENSMUST00000228396 1352 ntBASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Smc1aQ9CU62 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Smc1aQ9CU62 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Gm9519-201ENSMUST00000206108 1337 ntBASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Gm25917-201ENSMUST00000104267 130 ntBASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Gm25433-201ENSMUST00000158283 286 ntBASIC6.78□□□□□ -1.32
Smc1aQ9CU62 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Gm27960-201ENSMUST00000183445 184 ntBASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Smc1aQ9CU62 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC6.78□□□□□ -1.32
Smc1aQ9CU62 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Smc1aQ9CU62 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Gm15583-201ENSMUST00000116191 3510 ntBASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Smc1aQ9CU62 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC6.78□□□□□ -1.32
Smc1aQ9CU62 AC158779.2-201ENSMUST00000227902 1947 ntBASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Smc1aQ9CU62 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.32
Smc1aQ9CU62 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.32
Smc1aQ9CU62 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Smc1aQ9CU62 CT009757.5-201ENSMUST00000221858 3425 ntBASIC6.77□□□□□ -1.33
Smc1aQ9CU62 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Gm24173-201ENSMUST00000104130 128 ntBASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Gm9836-201ENSMUST00000117132 216 ntBASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Gm15040-201ENSMUST00000118561 1241 ntBASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Gm14938-201ENSMUST00000119482 943 ntBASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Gm24395-201ENSMUST00000158139 125 ntBASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Gm15257-201ENSMUST00000177680 883 ntBASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Gm15252-201ENSMUST00000177750 883 ntBASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Gm15256-201ENSMUST00000177793 883 ntBASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Gm15260-201ENSMUST00000179402 883 ntBASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Gm7952-201ENSMUST00000180540 984 ntBASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Ighv1-27-201ENSMUST00000194473 340 ntBASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Gm42753-201ENSMUST00000196718 1268 ntBASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Gm17824-201ENSMUST00000197690 805 ntBASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Gm44360-201ENSMUST00000200081 82 ntBASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Gm45628-201ENSMUST00000210849 274 ntBASIC6.77□□□□□ -1.33
Smc1aQ9CU62 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC6.77□□□□□ -1.33
Smc1aQ9CU62 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Gm19195-201ENSMUST00000222018 511 ntBASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC6.77□□□□□ -1.33
Smc1aQ9CU62 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms