Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Gm9556-201ENSMUST00000182938 940 ntBASIC5.62□□□□□ -1.51
Use1Q9CQ56 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Ighv1-10-201ENSMUST00000194372 355 ntBASIC5.62□□□□□ -1.51
Use1Q9CQ56 Gm4332-201ENSMUST00000196114 346 ntBASIC5.62□□□□□ -1.51
Use1Q9CQ56 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Gm43467-201ENSMUST00000197441 437 ntBASIC5.62□□□□□ -1.51
Use1Q9CQ56 AC151967.1-201ENSMUST00000198146 76 ntBASIC5.62□□□□□ -1.51
Use1Q9CQ56 Gm31211-201ENSMUST00000199170 253 ntBASIC5.62□□□□□ -1.51
Use1Q9CQ56 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 BC049739-201ENSMUST00000202626 660 ntBASIC5.62□□□□□ -1.51
Use1Q9CQ56 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.62□□□□□ -1.51
Use1Q9CQ56 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Gm10095-201ENSMUST00000222765 483 ntBASIC5.62□□□□□ -1.51
Use1Q9CQ56 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Use1Q9CQ56 AC114008.1-201ENSMUST00000226193 937 ntBASIC5.62□□□□□ -1.51
Use1Q9CQ56 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Gm24041-201ENSMUST00000083115 156 ntBASIC5.62□□□□□ -1.51
Use1Q9CQ56 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Gm14667-201ENSMUST00000119448 1350 ntBASIC5.62□□□□□ -1.51
Use1Q9CQ56 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Gm18880-201ENSMUST00000223333 1541 ntBASIC5.62□□□□□ -1.51
Use1Q9CQ56 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Use1Q9CQ56 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
Use1Q9CQ56 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.61□□□□□ -1.51
Use1Q9CQ56 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Use1Q9CQ56 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Use1Q9CQ56 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Use1Q9CQ56 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Use1Q9CQ56 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Use1Q9CQ56 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Use1Q9CQ56 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Use1Q9CQ56 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.61□□□□□ -1.51
Use1Q9CQ56 Gm15275-201ENSMUST00000154752 347 ntBASIC5.61□□□□□ -1.51
Use1Q9CQ56 Gm26162-201ENSMUST00000157793 132 ntBASIC5.61□□□□□ -1.51
Use1Q9CQ56 Mir1945-201ENSMUST00000157919 78 ntBASIC5.61□□□□□ -1.51
Use1Q9CQ56 Gm24103-201ENSMUST00000174930 77 ntBASIC5.61□□□□□ -1.51
Use1Q9CQ56 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Use1Q9CQ56 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Use1Q9CQ56 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Use1Q9CQ56 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC5.61□□□□□ -1.51
Use1Q9CQ56 Gm43743-202ENSMUST00000198353 491 ntBASIC5.61□□□□□ -1.51
Use1Q9CQ56 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC5.61□□□□□ -1.51
Use1Q9CQ56 Gm18290-201ENSMUST00000202900 844 ntBASIC5.61□□□□□ -1.51
Use1Q9CQ56 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Use1Q9CQ56 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Use1Q9CQ56 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.61□□□□□ -1.51
Use1Q9CQ56 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC5.61□□□□□ -1.51
Use1Q9CQ56 AC125019.1-201ENSMUST00000224809 908 ntBASIC5.61□□□□□ -1.51
Use1Q9CQ56 AC137902.1-201ENSMUST00000228184 102 ntBASIC5.61□□□□□ -1.51
Use1Q9CQ56 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Use1Q9CQ56 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Use1Q9CQ56 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC5.61□□□□□ -1.51
Use1Q9CQ56 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Use1Q9CQ56 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Use1Q9CQ56 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Use1Q9CQ56 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.61□□□□□ -1.51
Use1Q9CQ56 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Use1Q9CQ56 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Use1Q9CQ56 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
Use1Q9CQ56 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.61□□□□□ -1.51
Use1Q9CQ56 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Use1Q9CQ56 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.6□□□□□ -1.51
Use1Q9CQ56 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.6□□□□□ -1.51
Use1Q9CQ56 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.6□□□□□ -1.51
Use1Q9CQ56 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Gm11445-201ENSMUST00000119101 532 ntBASIC5.6□□□□□ -1.51
Use1Q9CQ56 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Use1Q9CQ56 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms