Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 Gm18700-201ENSMUST00000185791 553 ntBASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 BC049739-201ENSMUST00000202626 660 ntBASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 Gm44108-201ENSMUST00000203525 422 ntBASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 Gm44856-201ENSMUST00000206639 304 ntBASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 Gm45448-201ENSMUST00000211739 209 ntBASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 Gm8863-201ENSMUST00000216630 926 ntBASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 AC164618.3-201ENSMUST00000224863 681 ntBASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 AC131117.1-201ENSMUST00000225154 1171 ntBASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 AC167013.4-201ENSMUST00000226712 317 ntBASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 AC154757.2-201ENSMUST00000228885 743 ntBASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 AC166358.5-201ENSMUST00000220706 1302 ntBASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Cdk5rap3Q99LM2 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Gm18880-201ENSMUST00000223333 1541 ntBASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Gm23768-201ENSMUST00000104440 131 ntBASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Gm14116-201ENSMUST00000117733 805 ntBASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Gm12308-201ENSMUST00000120440 389 ntBASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Gm15840-201ENSMUST00000122099 943 ntBASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Snora47-201ENSMUST00000157483 138 ntBASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Gm25904-201ENSMUST00000158491 143 ntBASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Gm9556-201ENSMUST00000182938 940 ntBASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Gm37784-201ENSMUST00000193233 189 ntBASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Gm43467-201ENSMUST00000197441 437 ntBASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Gm42464-202ENSMUST00000198111 774 ntBASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Gm44607-201ENSMUST00000205611 1090 ntBASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 AC124601.1-201ENSMUST00000220531 135 ntBASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 AC164618.1-201ENSMUST00000225769 592 ntBASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 AC164302.1-201ENSMUST00000227036 433 ntBASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Olfr192-201ENSMUST00000080251 925 ntBASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 n-R5s58-201ENSMUST00000093682 119 ntBASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Gm15583-201ENSMUST00000116191 3510 ntBASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Gm43612-201ENSMUST00000196087 3207 ntBASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdk5rap3Q99LM2 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Gm8979-201ENSMUST00000183386 7296 ntBASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdk5rap3Q99LM2 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms