Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC4.72□□□□□ -1.65
Nup35Q8R4R6 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Gm22650-201ENSMUST00000175138 105 ntBASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Nup35Q8R4R6 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Nup35Q8R4R6 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Gm28114-201ENSMUST00000187232 379 ntBASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Gm8581-201ENSMUST00000188636 890 ntBASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Gm17952-201ENSMUST00000193914 747 ntBASIC4.72□□□□□ -1.65
Nup35Q8R4R6 AC122844.1-201ENSMUST00000195971 107 ntBASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Gm3544-201ENSMUST00000196129 305 ntBASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Gm43396-201ENSMUST00000197506 706 ntBASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC4.72□□□□□ -1.65
Nup35Q8R4R6 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Gm45722-201ENSMUST00000213075 466 ntBASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Nup35Q8R4R6 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Gm19125-201ENSMUST00000188408 1383 ntBASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Gm5832-201ENSMUST00000121704 1582 ntBASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Gm37101-201ENSMUST00000191656 3660 ntBASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Gm19514-201ENSMUST00000206856 4489 ntBASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Gm36936-201ENSMUST00000194508 2749 ntBASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Nup35Q8R4R6 Gm37551-201ENSMUST00000195556 2861 ntBASIC4.71□□□□□ -1.65
Nup35Q8R4R6 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
Nup35Q8R4R6 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
Nup35Q8R4R6 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
Nup35Q8R4R6 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
Nup35Q8R4R6 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Gm44586-201ENSMUST00000207166 2737 ntBASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Gm25346-201ENSMUST00000104509 128 ntBASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Gm12713-201ENSMUST00000118404 764 ntBASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Gm13679-201ENSMUST00000118678 484 ntBASIC4.71□□□□□ -1.66
Nup35Q8R4R6 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Nup35Q8R4R6 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Gm8032-201ENSMUST00000171009 574 ntBASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Gm28885-201ENSMUST00000185615 563 ntBASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Gm38040-201ENSMUST00000193505 225 ntBASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Gm20128-201ENSMUST00000196189 417 ntBASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Gm44940-201ENSMUST00000206225 1247 ntBASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Gm44809-201ENSMUST00000208305 993 ntBASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Gm19324-201ENSMUST00000213229 1169 ntBASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Gm7570-201ENSMUST00000215246 698 ntBASIC4.71□□□□□ -1.66
Nup35Q8R4R6 AC163667.1-201ENSMUST00000225201 1289 ntBASIC4.71□□□□□ -1.66
Nup35Q8R4R6 AC170999.2-201ENSMUST00000226223 264 ntBASIC4.71□□□□□ -1.66
Nup35Q8R4R6 AC122937.2-201ENSMUST00000228258 1051 ntBASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Nup35Q8R4R6 n-R5s58-201ENSMUST00000093682 119 ntBASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Gm17165-201ENSMUST00000096155 493 ntBASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Gm8750-201ENSMUST00000173278 1537 ntBASIC4.71□□□□□ -1.66
Nup35Q8R4R6 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Nup35Q8R4R6 Gm37846-201ENSMUST00000191840 3774 ntBASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Gm37140-201ENSMUST00000192914 1684 ntBASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Gm37060-201ENSMUST00000194997 2397 ntBASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Nup35Q8R4R6 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms