Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Gm37358-201ENSMUST00000195492 479 ntBASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Gm5886-202ENSMUST00000203957 522 ntBASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Gm8863-201ENSMUST00000216630 926 ntBASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 CT030238.4-202ENSMUST00000226143 745 ntBASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Gm5229-201ENSMUST00000039375 354 ntBASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Mir7b-201ENSMUST00000083557 111 ntBASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Gm37356-201ENSMUST00000193362 1613 ntBASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC6.72□□□□□ -1.33
Ccdc38Q8CDN8 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ccdc38Q8CDN8 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Ccdc38Q8CDN8 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Ccdc38Q8CDN8 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.71□□□□□ -1.33
Ccdc38Q8CDN8 Gm44102-201ENSMUST00000204031 1666 ntBASIC6.71□□□□□ -1.33
Ccdc38Q8CDN8 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Ccdc38Q8CDN8 Gm38325-201ENSMUST00000194507 1377 ntBASIC6.71□□□□□ -1.33
Ccdc38Q8CDN8 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ccdc38Q8CDN8 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Ccdc38Q8CDN8 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC6.71□□□□□ -1.33
Ccdc38Q8CDN8 Gm5844-201ENSMUST00000119417 2191 ntBASIC6.71□□□□□ -1.33
Ccdc38Q8CDN8 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Ccdc38Q8CDN8 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Gm15765-201ENSMUST00000118407 910 ntBASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Gm14054-201ENSMUST00000120744 704 ntBASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Rps29-ps-201ENSMUST00000122083 172 ntBASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Gm12504-202ENSMUST00000148026 306 ntBASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Gm14747-201ENSMUST00000149888 984 ntBASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Gm16297-201ENSMUST00000161466 459 ntBASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Gm17223-201ENSMUST00000171413 481 ntBASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Gm4152-201ENSMUST00000172675 259 ntBASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Gm27193-201ENSMUST00000184217 586 ntBASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Gm42428-201ENSMUST00000198677 302 ntBASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Gm7351-201ENSMUST00000210745 580 ntBASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 AC153954.2-201ENSMUST00000213811 287 ntBASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Gm19212-201ENSMUST00000216642 862 ntBASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 AC124420.1-201ENSMUST00000219779 791 ntBASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 AC124510.2-201ENSMUST00000221958 683 ntBASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Glycam1-204ENSMUST00000228895 641 ntBASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Gm8412-201ENSMUST00000077493 440 ntBASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Naip3-201ENSMUST00000118082 4208 ntBASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Gm9521-201ENSMUST00000206656 1516 ntBASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Ccdc38Q8CDN8 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Gm45493-201ENSMUST00000209494 3948 ntBASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Mcf2-201ENSMUST00000033478 3659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Gm37833-201ENSMUST00000194342 3256 ntBASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Gm12375-201ENSMUST00000119331 921 ntBASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Gm11990-201ENSMUST00000121505 897 ntBASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Ccdc38Q8CDN8 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms