Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 AC154250.1-201ENSMUST00000224775 489 ntBASIC5.89□□□□□ -1.47
Lrif1Q8CDD9 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Lrif1Q8CDD9 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Lrif1Q8CDD9 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Lrif1Q8CDD9 Gm22300-201ENSMUST00000082661 126 ntBASIC5.89□□□□□ -1.47
Lrif1Q8CDD9 Gm22581-201ENSMUST00000083735 136 ntBASIC5.89□□□□□ -1.47
Lrif1Q8CDD9 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.89□□□□□ -1.47
Lrif1Q8CDD9 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Lrif1Q8CDD9 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Lrif1Q8CDD9 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Lrif1Q8CDD9 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC5.89□□□□□ -1.47
Lrif1Q8CDD9 Dennd6a-204ENSMUST00000224248 2775 ntBASIC5.89□□□□□ -1.47
Lrif1Q8CDD9 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.89□□□□□ -1.47
Lrif1Q8CDD9 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm11271-201ENSMUST00000116054 440 ntBASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm9005-201ENSMUST00000119908 607 ntBASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm25219-201ENSMUST00000157545 330 ntBASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Esd-ps-201ENSMUST00000170684 847 ntBASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm26557-201ENSMUST00000180756 493 ntBASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm5430-201ENSMUST00000182525 915 ntBASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm27998-201ENSMUST00000184902 361 ntBASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm7626-201ENSMUST00000195801 353 ntBASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm44463-201ENSMUST00000198895 137 ntBASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm43748-201ENSMUST00000202329 1233 ntBASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm44422-201ENSMUST00000204142 1025 ntBASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm18103-201ENSMUST00000216621 779 ntBASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 AC154219.1-201ENSMUST00000220764 1262 ntBASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 AC154431.2-201ENSMUST00000225215 1055 ntBASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 AC129537.1-201ENSMUST00000226596 1228 ntBASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 AC154757.2-201ENSMUST00000228885 743 ntBASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Lrif1Q8CDD9 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 Gm43719-201ENSMUST00000200088 2199 ntBASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 Gm25346-201ENSMUST00000104509 128 ntBASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 Gm14772-201ENSMUST00000116562 514 ntBASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 Gm13870-201ENSMUST00000117214 1023 ntBASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 Gm16007-201ENSMUST00000117837 286 ntBASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 Gm14580-201ENSMUST00000119122 718 ntBASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 Gm13818-201ENSMUST00000119441 511 ntBASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 Gm12307-201ENSMUST00000120581 590 ntBASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 Gm11990-201ENSMUST00000121505 897 ntBASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 Gm26738-201ENSMUST00000181312 601 ntBASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 Gm27037-201ENSMUST00000182270 960 ntBASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 Gm37358-201ENSMUST00000195492 479 ntBASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 Gm44163-201ENSMUST00000205140 475 ntBASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 Gm18805-201ENSMUST00000206872 655 ntBASIC5.87□□□□□ -1.47
Lrif1Q8CDD9 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms