Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Vps53Q8CCB4 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Gm13338-201ENSMUST00000120235 361 ntBASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Mup-ps15-201ENSMUST00000121741 539 ntBASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Gm25332-201ENSMUST00000158038 105 ntBASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Mir7674-201ENSMUST00000184964 63 ntBASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Gm37770-201ENSMUST00000192855 772 ntBASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Gm37517-201ENSMUST00000194004 1289 ntBASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 BC049739-201ENSMUST00000202626 660 ntBASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Gm44312-201ENSMUST00000203536 469 ntBASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC7.18□□□□□ -1.26
Vps53Q8CCB4 AC153968.2-201ENSMUST00000215579 1140 ntBASIC7.18□□□□□ -1.26
Vps53Q8CCB4 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Gm43343-201ENSMUST00000202454 1926 ntBASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Vps53Q8CCB4 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Vps53Q8CCB4 AC130661.1-201ENSMUST00000218248 1680 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Gm22103-201ENSMUST00000116733 121 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Gm26475-201ENSMUST00000116769 121 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Gm23620-201ENSMUST00000116812 121 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Gm25042-201ENSMUST00000116856 121 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Gm25540-201ENSMUST00000116880 121 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Gm14485-201ENSMUST00000119489 493 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 n-R5s201-201ENSMUST00000122622 116 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC7.17□□□□□ -1.26
Vps53Q8CCB4 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Gm23207-201ENSMUST00000158665 102 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Gm20401-201ENSMUST00000173717 212 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Gm23550-201ENSMUST00000179003 121 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Gm25123-201ENSMUST00000179154 121 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Gm25353-201ENSMUST00000179366 121 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Gm22992-201ENSMUST00000179496 121 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Gm25892-201ENSMUST00000179867 121 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Gm24092-201ENSMUST00000180257 121 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Gm28934-201ENSMUST00000186491 346 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Gm37215-201ENSMUST00000194927 1259 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Gm3544-201ENSMUST00000196129 305 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Gm42753-201ENSMUST00000196718 1268 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Gm43382-201ENSMUST00000198954 838 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 AC155941.1-201ENSMUST00000220223 529 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Gm9321-201ENSMUST00000221179 778 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Gm7557-201ENSMUST00000221935 865 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 AC129597.1-201ENSMUST00000223046 1234 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 AC091783.3-201ENSMUST00000223969 681 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Gm15732-201ENSMUST00000079794 480 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Olfr467-201ENSMUST00000084756 927 ntBASIC7.17□□□□□ -1.26
Vps53Q8CCB4 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms