Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm37098-201ENSMUST00000192290 244 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm38122-201ENSMUST00000192679 885 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm17833-201ENSMUST00000197629 1065 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm43656-201ENSMUST00000197882 434 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm43345-201ENSMUST00000199484 269 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm17834-201ENSMUST00000204322 891 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm9367-201ENSMUST00000205703 546 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm17950-201ENSMUST00000214617 646 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm18940-201ENSMUST00000222518 871 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm2139-201ENSMUST00000222569 1075 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 AC154640.3-201ENSMUST00000227492 846 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 AC154806.5-204ENSMUST00000228900 867 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Gm42597-201ENSMUST00000196663 1544 ntBASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Trim47Q8C0E3 AC122828.2-201ENSMUST00000222511 2880 ntBASIC7.96□□□□□ -1.13
Trim47Q8C0E3 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC7.96□□□□□ -1.13
Trim47Q8C0E3 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Trim47Q8C0E3 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Fto-204ENSMUST00000136802 3751 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Gm11386-201ENSMUST00000117761 347 ntBASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Gm11624-201ENSMUST00000118579 1041 ntBASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Gm12879-201ENSMUST00000120003 1182 ntBASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Gm13743-201ENSMUST00000121486 724 ntBASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Gm14251-201ENSMUST00000122133 279 ntBASIC7.96□□□□□ -1.14
Trim47Q8C0E3 n-R5s207-201ENSMUST00000122497 118 ntBASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Gm23591-201ENSMUST00000157663 286 ntBASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Gm26323-201ENSMUST00000157743 175 ntBASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Mir1930-201ENSMUST00000158799 84 ntBASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Gm4613-201ENSMUST00000165488 276 ntBASIC7.96□□□□□ -1.14
Trim47Q8C0E3 n-R5s93-201ENSMUST00000180091 119 ntBASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Gm29550-201ENSMUST00000185543 285 ntBASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Gm29216-201ENSMUST00000187117 492 ntBASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC7.96□□□□□ -1.14
Trim47Q8C0E3 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Gm42824-201ENSMUST00000199361 247 ntBASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Gm45427-201ENSMUST00000209572 1253 ntBASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Gm2829-201ENSMUST00000213121 499 ntBASIC7.96□□□□□ -1.14
Trim47Q8C0E3 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC7.96□□□□□ -1.14
Trim47Q8C0E3 AC162376.1-201ENSMUST00000220120 435 ntBASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC7.96□□□□□ -1.14
Trim47Q8C0E3 AC154767.2-201ENSMUST00000224584 414 ntBASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC7.96□□□□□ -1.14
Trim47Q8C0E3 CT009515.3-201ENSMUST00000226509 671 ntBASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Gm37520-201ENSMUST00000194883 2672 ntBASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Trim47Q8C0E3 AC170999.1-201ENSMUST00000226359 1585 ntBASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Trim47Q8C0E3 AC156645.1-201ENSMUST00000223066 5194 ntBASIC7.96□□□□□ -1.14
Trim47Q8C0E3 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm13100-201ENSMUST00000117157 1439 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm37924-201ENSMUST00000195470 3647 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm42676-201ENSMUST00000197609 2686 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm22671-201ENSMUST00000104420 134 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Igkv13-87-201ENSMUST00000114214 286 ntBASIC7.95□□□□□ -1.14
Trim47Q8C0E3 Gm16400-201ENSMUST00000116523 1029 ntBASIC7.95□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 106.9 ms