Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Gm24359-201ENSMUST00000158418 221 ntBASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Gm21399-201ENSMUST00000180210 597 ntBASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Mir7235-201ENSMUST00000183796 56 ntBASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Gm29650-201ENSMUST00000188485 742 ntBASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Gm36974-201ENSMUST00000194200 1071 ntBASIC8.42□□□□□ -1.06
Usp40Q8BWR4 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Mir6906-201ENSMUST00000198998 58 ntBASIC8.42□□□□□ -1.06
Usp40Q8BWR4 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC8.42□□□□□ -1.06
Usp40Q8BWR4 AC131117.1-201ENSMUST00000225154 1171 ntBASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Mir143-201ENSMUST00000083511 63 ntBASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Usp40Q8BWR4 AC022682.2-202ENSMUST00000224394 3943 ntBASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Gm38077-201ENSMUST00000193657 3245 ntBASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Usp40Q8BWR4 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 AC105407.2-205ENSMUST00000224680 2733 ntBASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Gm43169-201ENSMUST00000199544 4734 ntBASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Gm37370-201ENSMUST00000191996 1410 ntBASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 AC159308.1-201ENSMUST00000216615 1351 ntBASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Mir466f-4-201ENSMUST00000116930 121 ntBASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Gm37932-201ENSMUST00000192258 1167 ntBASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Gm37700-201ENSMUST00000192617 965 ntBASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Trdv3-201ENSMUST00000198551 309 ntBASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Gm43945-201ENSMUST00000203595 754 ntBASIC8.41□□□□□ -1.06
Usp40Q8BWR4 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 AC164597.1-201ENSMUST00000226538 514 ntBASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Usp40Q8BWR4 Gm3563-201ENSMUST00000172963 1628 ntBASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC8.4□□□□□ -1.06
Usp40Q8BWR4 AC154841.1-201ENSMUST00000227263 1479 ntBASIC8.4□□□□□ -1.06
Usp40Q8BWR4 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms