Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Gm15967-201ENSMUST00000120027 1116 ntBASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Gm11472-201ENSMUST00000121305 556 ntBASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Gm2619-202ENSMUST00000166777 651 ntBASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Gm20637-201ENSMUST00000175715 462 ntBASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Gm17934-201ENSMUST00000192818 422 ntBASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Gm20940-201ENSMUST00000197308 360 ntBASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 AC154450.1-201ENSMUST00000220911 485 ntBASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 AC154640.3-201ENSMUST00000227492 846 ntBASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Gm22300-201ENSMUST00000082661 126 ntBASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Gm42507-201ENSMUST00000201187 2555 ntBASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC6.34□□□□□ -1.39
Ccdc40Q8BI79 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Ccdc40Q8BI79 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Ccdc40Q8BI79 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.4
Ccdc40Q8BI79 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC6.34□□□□□ -1.4
Ccdc40Q8BI79 AC130831.1-201ENSMUST00000224546 1474 ntBASIC6.34□□□□□ -1.4
Ccdc40Q8BI79 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Ccdc40Q8BI79 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.34□□□□□ -1.4
Ccdc40Q8BI79 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Ccdc40Q8BI79 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC6.34□□□□□ -1.4
Ccdc40Q8BI79 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Ccdc40Q8BI79 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Gm4973-201ENSMUST00000206925 1334 ntBASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Gm15366-201ENSMUST00000118433 1019 ntBASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Gm15040-201ENSMUST00000118561 1241 ntBASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Gm14930-201ENSMUST00000118864 652 ntBASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Gm12026-201ENSMUST00000120961 1024 ntBASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Gm12140-201ENSMUST00000121214 544 ntBASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Gm14603-201ENSMUST00000121275 448 ntBASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Gm26162-201ENSMUST00000157793 132 ntBASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Ighv1-29-201ENSMUST00000194116 342 ntBASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Gm37838-201ENSMUST00000194464 312 ntBASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Gm8291-201ENSMUST00000209635 1261 ntBASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.33□□□□□ -1.4
Ccdc40Q8BI79 Gm18510-201ENSMUST00000219335 1096 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 104.5 ms