Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ddx55Q6ZPL9 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ddx55Q6ZPL9 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Ddx55Q6ZPL9 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Ddx55Q6ZPL9 Gm44750-201ENSMUST00000206185 2223 ntBASIC7.1□□□□□ -1.27
Ddx55Q6ZPL9 Gm37283-201ENSMUST00000193111 1571 ntBASIC7.1□□□□□ -1.27
Ddx55Q6ZPL9 Gm37474-201ENSMUST00000194812 1814 ntBASIC7.1□□□□□ -1.27
Ddx55Q6ZPL9 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Ddx55Q6ZPL9 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ddx55Q6ZPL9 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Ddx55Q6ZPL9 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Ddx55Q6ZPL9 Gm43627-201ENSMUST00000197119 2299 ntBASIC7.1□□□□□ -1.27
Ddx55Q6ZPL9 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm45516-201ENSMUST00000211588 4182 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm24230-201ENSMUST00000104313 129 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm13870-201ENSMUST00000117214 1023 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm3943-201ENSMUST00000118606 718 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm14908-201ENSMUST00000120930 1286 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm13533-201ENSMUST00000121104 177 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm22529-201ENSMUST00000158817 123 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm23945-201ENSMUST00000179609 92 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm27004-201ENSMUST00000183300 727 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm28943-201ENSMUST00000186187 615 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm28736-201ENSMUST00000186257 615 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm29401-201ENSMUST00000186690 615 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm29178-204ENSMUST00000186784 615 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm29356-201ENSMUST00000186935 373 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm28589-201ENSMUST00000186991 615 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm28936-201ENSMUST00000187153 615 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm29121-201ENSMUST00000187611 615 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm28243-201ENSMUST00000187801 615 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm28844-202ENSMUST00000187977 615 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm29058-201ENSMUST00000189510 615 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm29624-201ENSMUST00000190018 615 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm28780-201ENSMUST00000190223 615 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm28969-211ENSMUST00000190992 615 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm28990-207ENSMUST00000191219 615 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm36468-201ENSMUST00000192119 615 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm31572-201ENSMUST00000193341 615 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm30175-201ENSMUST00000194173 615 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm30858-201ENSMUST00000195516 615 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm31211-201ENSMUST00000199170 253 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Igkv12-66-201ENSMUST00000199305 348 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm43456-201ENSMUST00000202519 457 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm31166-201ENSMUST00000209326 288 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm18242-201ENSMUST00000218455 542 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm9202-201ENSMUST00000223036 437 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 AC168056.2-201ENSMUST00000223591 269 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 AC123534.1-201ENSMUST00000224060 656 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 AL670757.1-201ENSMUST00000223668 1959 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 AC158537.1-201ENSMUST00000224637 1711 ntBASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC7.09□□□□□ -1.27
Ddx55Q6ZPL9 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
Ddx55Q6ZPL9 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Ddx55Q6ZPL9 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
Ddx55Q6ZPL9 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Ddx55Q6ZPL9 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms