Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm26167-201ENSMUST00000158423 253 ntBASIC5.95□□□□□ -1.46
ClpbQ60649 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC5.95□□□□□ -1.46
ClpbQ60649 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
ClpbQ60649 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC5.95□□□□□ -1.46
ClpbQ60649 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ClpbQ60649 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC5.95□□□□□ -1.46
ClpbQ60649 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ClpbQ60649 Gm28803-201ENSMUST00000190385 764 ntBASIC5.95□□□□□ -1.46
ClpbQ60649 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
ClpbQ60649 Gm3321-201ENSMUST00000200603 1129 ntBASIC5.95□□□□□ -1.46
ClpbQ60649 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC5.95□□□□□ -1.46
ClpbQ60649 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC5.95□□□□□ -1.46
ClpbQ60649 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC5.95□□□□□ -1.46
ClpbQ60649 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC5.95□□□□□ -1.46
ClpbQ60649 Gm7557-201ENSMUST00000221935 865 ntBASIC5.95□□□□□ -1.46
ClpbQ60649 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC5.95□□□□□ -1.46
ClpbQ60649 Cma2-202ENSMUST00000228263 857 ntBASIC5.95□□□□□ -1.46
ClpbQ60649 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
ClpbQ60649 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ClpbQ60649 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ClpbQ60649 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ClpbQ60649 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
ClpbQ60649 Gm43503-201ENSMUST00000200033 3408 ntBASIC5.95□□□□□ -1.46
ClpbQ60649 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ClpbQ60649 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
ClpbQ60649 Gm37951-201ENSMUST00000192963 3032 ntBASIC5.95□□□□□ -1.46
ClpbQ60649 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
ClpbQ60649 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
ClpbQ60649 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
ClpbQ60649 Gm37864-201ENSMUST00000195308 3075 ntBASIC5.95□□□□□ -1.46
ClpbQ60649 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
ClpbQ60649 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ClpbQ60649 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ClpbQ60649 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC5.94□□□□□ -1.46
ClpbQ60649 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
ClpbQ60649 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ClpbQ60649 Gm2080-201ENSMUST00000211299 1573 ntBASIC5.94□□□□□ -1.46
ClpbQ60649 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ClpbQ60649 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
ClpbQ60649 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
ClpbQ60649 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
ClpbQ60649 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC5.94□□□□□ -1.46
ClpbQ60649 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
ClpbQ60649 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
ClpbQ60649 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
ClpbQ60649 Gm14756-201ENSMUST00000116395 240 ntBASIC5.94□□□□□ -1.46
ClpbQ60649 Gm9836-201ENSMUST00000117132 216 ntBASIC5.94□□□□□ -1.46
ClpbQ60649 Gm8855-201ENSMUST00000118888 878 ntBASIC5.94□□□□□ -1.46
ClpbQ60649 Gm14054-201ENSMUST00000120744 704 ntBASIC5.94□□□□□ -1.46
ClpbQ60649 Gm12731-201ENSMUST00000120932 268 ntBASIC5.94□□□□□ -1.46
ClpbQ60649 Gm15786-201ENSMUST00000121079 450 ntBASIC5.94□□□□□ -1.46
ClpbQ60649 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC5.94□□□□□ -1.46
ClpbQ60649 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC5.94□□□□□ -1.46
ClpbQ60649 Mir1960-201ENSMUST00000157488 78 ntBASIC5.94□□□□□ -1.46
ClpbQ60649 Gm23386-201ENSMUST00000158585 144 ntBASIC5.94□□□□□ -1.46
ClpbQ60649 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC5.94□□□□□ -1.46
ClpbQ60649 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC5.94□□□□□ -1.46
ClpbQ60649 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ClpbQ60649 Gm37770-201ENSMUST00000192855 772 ntBASIC5.94□□□□□ -1.46
ClpbQ60649 Gm8860-201ENSMUST00000193160 445 ntBASIC5.94□□□□□ -1.46
ClpbQ60649 Gm37725-201ENSMUST00000193965 2125 ntBASIC5.94□□□□□ -1.46
ClpbQ60649 Gm37991-201ENSMUST00000194297 696 ntBASIC5.94□□□□□ -1.46
ClpbQ60649 Gm37477-201ENSMUST00000195215 884 ntBASIC5.94□□□□□ -1.46
ClpbQ60649 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC5.94□□□□□ -1.46
ClpbQ60649 Gm3544-201ENSMUST00000196129 305 ntBASIC5.94□□□□□ -1.46
ClpbQ60649 Gm18747-201ENSMUST00000198129 648 ntBASIC5.94□□□□□ -1.46
ClpbQ60649 Igkv4-73-201ENSMUST00000199760 358 ntBASIC5.94□□□□□ -1.46
ClpbQ60649 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC5.94□□□□□ -1.46
ClpbQ60649 Gm5027-201ENSMUST00000206700 375 ntBASIC5.94□□□□□ -1.46
ClpbQ60649 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC5.94□□□□□ -1.46
ClpbQ60649 AC104906.1-201ENSMUST00000218122 913 ntBASIC5.94□□□□□ -1.46
ClpbQ60649 AC122371.2-201ENSMUST00000220583 366 ntBASIC5.94□□□□□ -1.46
ClpbQ60649 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC5.94□□□□□ -1.46
ClpbQ60649 AC131187.2-201ENSMUST00000223936 994 ntBASIC5.94□□□□□ -1.46
ClpbQ60649 AC129219.1-201ENSMUST00000224336 448 ntBASIC5.94□□□□□ -1.46
ClpbQ60649 CT009556.1-201ENSMUST00000227282 449 ntBASIC5.94□□□□□ -1.46
ClpbQ60649 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
ClpbQ60649 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ClpbQ60649 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
ClpbQ60649 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
ClpbQ60649 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
ClpbQ60649 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ClpbQ60649 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ClpbQ60649 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
ClpbQ60649 Gm15425-201ENSMUST00000119013 2711 ntBASIC5.94□□□□□ -1.46
ClpbQ60649 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ClpbQ60649 AC115760.1-201ENSMUST00000225160 1327 ntBASIC5.94□□□□□ -1.46
ClpbQ60649 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
ClpbQ60649 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ClpbQ60649 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
ClpbQ60649 AC164297.2-201ENSMUST00000224388 1508 ntBASIC5.94□□□□□ -1.46
ClpbQ60649 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
ClpbQ60649 Gm37100-201ENSMUST00000193344 1353 ntBASIC5.93□□□□□ -1.46
ClpbQ60649 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
ClpbQ60649 Gm43496-201ENSMUST00000201682 3001 ntBASIC5.93□□□□□ -1.46
ClpbQ60649 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
ClpbQ60649 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.93□□□□□ -1.46
ClpbQ60649 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
ClpbQ60649 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
ClpbQ60649 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms