Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.36□□□□□ -1.39
Upf3bQ3ULL6 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Gm8750-201ENSMUST00000173278 1537 ntBASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Gm45413-201ENSMUST00000210389 3538 ntBASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Gm10936-201ENSMUST00000105264 252 ntBASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Gm6744-201ENSMUST00000119303 543 ntBASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Gm4234-201ENSMUST00000119747 714 ntBASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Gm13438-201ENSMUST00000120100 573 ntBASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Gm13531-201ENSMUST00000121893 543 ntBASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Gm23995-201ENSMUST00000158060 129 ntBASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Gm23050-201ENSMUST00000158775 165 ntBASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Gm24741-201ENSMUST00000158857 106 ntBASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Gm26057-201ENSMUST00000178099 165 ntBASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Gm21399-201ENSMUST00000180210 597 ntBASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Gm3650-201ENSMUST00000180600 747 ntBASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Gm26607-201ENSMUST00000180661 867 ntBASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Mir6361-201ENSMUST00000185079 101 ntBASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Gm18352-201ENSMUST00000189113 902 ntBASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Gm43105-201ENSMUST00000202987 459 ntBASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Api5-ps-201ENSMUST00000206607 577 ntBASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 AC154767.2-201ENSMUST00000224584 414 ntBASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 AC159205.4-201ENSMUST00000225964 704 ntBASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Gm23624-201ENSMUST00000082463 321 ntBASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Upf3bQ3ULL6 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Gm44750-201ENSMUST00000206185 2223 ntBASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 AC121094.1-201ENSMUST00000224766 1345 ntBASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Mir700-201ENSMUST00000102169 79 ntBASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Gm12077-201ENSMUST00000117049 364 ntBASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Gm37341-201ENSMUST00000194680 371 ntBASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Gm44494-201ENSMUST00000196760 129 ntBASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Gm18592-201ENSMUST00000221529 276 ntBASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 AC113125.2-201ENSMUST00000226837 362 ntBASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Gm25515-201ENSMUST00000083858 157 ntBASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.34□□□□□ -1.39
Upf3bQ3ULL6 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.34□□□□□ -1.4
Upf3bQ3ULL6 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Upf3bQ3ULL6 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Upf3bQ3ULL6 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Upf3bQ3ULL6 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Upf3bQ3ULL6 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Upf3bQ3ULL6 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms