Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col17a1Q07563 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC9.32□□□□□ -0.92
Col17a1Q07563 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col17a1Q07563 Hist1h1d-201ENSMUST00000045301 7425 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Col17a1Q07563 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col17a1Q07563 Gm37205-201ENSMUST00000194820 2736 ntBASIC9.32□□□□□ -0.92
Col17a1Q07563 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Col17a1Q07563 Gm26023-201ENSMUST00000122722 313 ntBASIC9.32□□□□□ -0.92
Col17a1Q07563 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC9.32□□□□□ -0.92
Col17a1Q07563 Gm23023-201ENSMUST00000158767 109 ntBASIC9.32□□□□□ -0.92
Col17a1Q07563 Gm9687-201ENSMUST00000189312 602 ntBASIC9.32□□□□□ -0.92
Col17a1Q07563 Gm37774-201ENSMUST00000194401 245 ntBASIC9.32□□□□□ -0.92
Col17a1Q07563 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col17a1Q07563 Gm44219-201ENSMUST00000203005 273 ntBASIC9.32□□□□□ -0.92
Col17a1Q07563 Gm45359-201ENSMUST00000210635 427 ntBASIC9.32□□□□□ -0.92
Col17a1Q07563 Gm19174-201ENSMUST00000216944 956 ntBASIC9.32□□□□□ -0.92
Col17a1Q07563 CT030254.1-201ENSMUST00000225450 1078 ntBASIC9.32□□□□□ -0.92
Col17a1Q07563 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col17a1Q07563 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Col17a1Q07563 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC9.32□□□□□ -0.92
Col17a1Q07563 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col17a1Q07563 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col17a1Q07563 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col17a1Q07563 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
Col17a1Q07563 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col17a1Q07563 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC9.31□□□□□ -0.92
Col17a1Q07563 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col17a1Q07563 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Col17a1Q07563 Plxna4-201ENSMUST00000115096 12877 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col17a1Q07563 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col17a1Q07563 Gm37114-201ENSMUST00000195065 1804 ntBASIC9.31□□□□□ -0.92
Col17a1Q07563 Gm12057-201ENSMUST00000117244 1427 ntBASIC9.31□□□□□ -0.92
Col17a1Q07563 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col17a1Q07563 BC024978-201ENSMUST00000108379 7247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col17a1Q07563 Gm37790-201ENSMUST00000193136 3346 ntBASIC9.31□□□□□ -0.92
Col17a1Q07563 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col17a1Q07563 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Col17a1Q07563 Bcat1-201ENSMUST00000032402 7833 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col17a1Q07563 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col17a1Q07563 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC9.31□□□□□ -0.92
Col17a1Q07563 Gm25278-201ENSMUST00000157267 120 ntBASIC9.31□□□□□ -0.92
Col17a1Q07563 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col17a1Q07563 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col17a1Q07563 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col17a1Q07563 Gm6717-201ENSMUST00000185549 838 ntBASIC9.31□□□□□ -0.92
Col17a1Q07563 Gm43078-201ENSMUST00000197222 168 ntBASIC9.31□□□□□ -0.92
Col17a1Q07563 Gm32158-201ENSMUST00000200135 404 ntBASIC9.31□□□□□ -0.92
Col17a1Q07563 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col17a1Q07563 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC9.31□□□□□ -0.92
Col17a1Q07563 AC157515.1-201ENSMUST00000220953 450 ntBASIC9.31□□□□□ -0.92
Col17a1Q07563 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Col17a1Q07563 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Col17a1Q07563 Gm37082-201ENSMUST00000192629 1927 ntBASIC9.31□□□□□ -0.92
Col17a1Q07563 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC9.31□□□□□ -0.92
Col17a1Q07563 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col17a1Q07563 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col17a1Q07563 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Col17a1Q07563 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col17a1Q07563 Wdfy4-202ENSMUST00000130509 10158 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Col17a1Q07563 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col17a1Q07563 Myo6-201ENSMUST00000035889 7871 ntTSL 5 BASIC9.31□□□□□ -0.92
Col17a1Q07563 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col17a1Q07563 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col17a1Q07563 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Col17a1Q07563 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
Col17a1Q07563 Vmn1r199-202ENSMUST00000227685 5713 ntAPPRIS P2 BASIC9.31□□□□□ -0.92
Col17a1Q07563 Cdh23-203ENSMUST00000105462 10592 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Col17a1Q07563 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Col17a1Q07563 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Col17a1Q07563 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC9.3□□□□□ -0.92
Col17a1Q07563 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col17a1Q07563 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Col17a1Q07563 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Col17a1Q07563 Gm13435-201ENSMUST00000120111 1023 ntBASIC9.3□□□□□ -0.92
Col17a1Q07563 Gm11498-201ENSMUST00000120660 949 ntBASIC9.3□□□□□ -0.92
Col17a1Q07563 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC9.3□□□□□ -0.92
Col17a1Q07563 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC9.3□□□□□ -0.92
Col17a1Q07563 Gm3257-201ENSMUST00000207217 675 ntBASIC9.3□□□□□ -0.92
Col17a1Q07563 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Col17a1Q07563 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC9.3□□□□□ -0.92
Col17a1Q07563 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC9.3□□□□□ -0.92
Col17a1Q07563 Gm45405-201ENSMUST00000211544 609 ntBASIC9.3□□□□□ -0.92
Col17a1Q07563 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Col17a1Q07563 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col17a1Q07563 Gm37180-201ENSMUST00000195335 2819 ntBASIC9.3□□□□□ -0.92
Col17a1Q07563 Myo1e-201ENSMUST00000034745 4625 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col17a1Q07563 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Col17a1Q07563 Gm43164-201ENSMUST00000202529 2128 ntBASIC9.3□□□□□ -0.92
Col17a1Q07563 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col17a1Q07563 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Col17a1Q07563 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC9.3□□□□□ -0.92
Col17a1Q07563 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Col17a1Q07563 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC9.3□□□□□ -0.92
Col17a1Q07563 Olfr527-202ENSMUST00000214143 3094 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Col17a1Q07563 Gm42653-201ENSMUST00000200644 2839 ntBASIC9.29□□□□□ -0.92
Col17a1Q07563 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col17a1Q07563 Gm12884-201ENSMUST00000120371 325 ntBASIC9.29□□□□□ -0.92
Col17a1Q07563 Gm22204-201ENSMUST00000122654 327 ntBASIC9.29□□□□□ -0.92
Col17a1Q07563 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Col17a1Q07563 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms