Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm28846-201ENSMUST00000189161 368 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm18775-201ENSMUST00000190763 586 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC5.88□□□□□ -1.47
Col8a1Q00780 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm6077-201ENSMUST00000196008 499 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm43576-201ENSMUST00000197937 871 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm8891-201ENSMUST00000198546 832 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm43233-201ENSMUST00000200491 616 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC5.88□□□□□ -1.47
Col8a1Q00780 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC5.88□□□□□ -1.47
Col8a1Q00780 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm20946-201ENSMUST00000212367 461 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC5.88□□□□□ -1.47
Col8a1Q00780 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC5.88□□□□□ -1.47
Col8a1Q00780 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC5.88□□□□□ -1.47
Col8a1Q00780 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm5612-201ENSMUST00000053326 375 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Col8a1Q00780 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Col8a1Q00780 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm25475-201ENSMUST00000082825 180 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Col8a1Q00780 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Col8a1Q00780 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Col8a1Q00780 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Col8a1Q00780 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm43022-201ENSMUST00000197067 4268 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm37033-201ENSMUST00000193199 7350 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 Gm43113-201ENSMUST00000199713 1754 ntBASIC5.88□□□□□ -1.47
Col8a1Q00780 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Col8a1Q00780 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col8a1Q00780 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col8a1Q00780 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm43398-201ENSMUST00000196584 2742 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col8a1Q00780 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col8a1Q00780 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm22194-201ENSMUST00000116869 95 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm5752-201ENSMUST00000117771 594 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm7700-201ENSMUST00000120273 970 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm16053-201ENSMUST00000120511 188 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm13440-201ENSMUST00000121665 496 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm13194-201ENSMUST00000142299 311 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Col8a1Q00780 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm24176-201ENSMUST00000158928 121 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm18128-201ENSMUST00000172625 511 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm22655-201ENSMUST00000174949 96 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm23810-201ENSMUST00000175150 74 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm22111-201ENSMUST00000178010 79 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm23687-201ENSMUST00000178664 79 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm17048-201ENSMUST00000179266 847 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm24566-201ENSMUST00000179286 79 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm23305-201ENSMUST00000179342 79 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm26389-201ENSMUST00000179819 79 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm22130-201ENSMUST00000179979 79 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm22393-201ENSMUST00000180153 79 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm25085-201ENSMUST00000180298 79 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm26557-201ENSMUST00000180756 493 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm43850-201ENSMUST00000202021 578 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm42850-201ENSMUST00000202094 201 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm18995-201ENSMUST00000202981 520 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Erc2-213ENSMUST00000211684 1074 ntTSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Col8a1Q00780 AC112274.2-201ENSMUST00000218436 170 ntBASIC5.87□□□□□ -1.47
Col8a1Q00780 AC138329.1-201ENSMUST00000225040 471 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms