Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Phldb2-202ENSMUST00000076333 5347 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PrkdcP97313 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PrkdcP97313 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PrkdcP97313 Foxn3-201ENSMUST00000046859 7705 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PrkdcP97313 Tbc1d14-201ENSMUST00000031094 4590 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
PrkdcP97313 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PrkdcP97313 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PrkdcP97313 Cacna1c-220ENSMUST00000189520 6570 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
PrkdcP97313 Gm44062-201ENSMUST00000203312 4857 ntBASIC3.94□□□□□ -1.78
PrkdcP97313 Gm45548-201ENSMUST00000210076 3167 ntBASIC3.94□□□□□ -1.78
PrkdcP97313 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PrkdcP97313 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PrkdcP97313 Gm5942-201ENSMUST00000120046 439 ntBASIC3.94□□□□□ -1.78
PrkdcP97313 Gm6175-201ENSMUST00000121351 400 ntBASIC3.94□□□□□ -1.78
PrkdcP97313 Gm15096-201ENSMUST00000121918 878 ntBASIC3.94□□□□□ -1.78
PrkdcP97313 Gm24444-201ENSMUST00000157244 308 ntBASIC3.94□□□□□ -1.78
PrkdcP97313 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PrkdcP97313 Gm17951-201ENSMUST00000198536 496 ntBASIC3.94□□□□□ -1.78
PrkdcP97313 AC165106.1-201ENSMUST00000227580 408 ntBASIC3.94□□□□□ -1.78
PrkdcP97313 AC074315.1-201ENSMUST00000228801 214 ntBASIC3.94□□□□□ -1.78
PrkdcP97313 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PrkdcP97313 Pde6h-202ENSMUST00000137768 5940 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PrkdcP97313 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
PrkdcP97313 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PrkdcP97313 Vps39-201ENSMUST00000028752 4339 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PrkdcP97313 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC3.94□□□□□ -1.78
PrkdcP97313 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PrkdcP97313 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PrkdcP97313 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC3.94□□□□□ -1.78
PrkdcP97313 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PrkdcP97313 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PrkdcP97313 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PrkdcP97313 Isy1-201ENSMUST00000089497 5837 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PrkdcP97313 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PrkdcP97313 Mars2-201ENSMUST00000061334 11294 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PrkdcP97313 Gm37205-201ENSMUST00000194820 2736 ntBASIC3.94□□□□□ -1.78
PrkdcP97313 Gm15170-201ENSMUST00000121593 2023 ntBASIC3.94□□□□□ -1.78
PrkdcP97313 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
PrkdcP97313 Gm13733-201ENSMUST00000117290 535 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 Gm11346-201ENSMUST00000118346 704 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 Gm22613-201ENSMUST00000122679 292 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC3.93□□□□□ -1.78
PrkdcP97313 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 Gm22411-201ENSMUST00000175462 126 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 Gm22002-201ENSMUST00000175622 125 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC3.93□□□□□ -1.78
PrkdcP97313 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC3.93□□□□□ -1.78
PrkdcP97313 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC3.93□□□□□ -1.78
PrkdcP97313 CR974592.1-201ENSMUST00000220422 574 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 AC238676.3-201ENSMUST00000223042 154 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PrkdcP97313 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PrkdcP97313 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PrkdcP97313 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PrkdcP97313 Gm28379-202ENSMUST00000187676 2896 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PrkdcP97313 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
PrkdcP97313 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC3.93□□□□□ -1.78
PrkdcP97313 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PrkdcP97313 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
PrkdcP97313 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
PrkdcP97313 Gm42798-201ENSMUST00000200853 3972 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 Epb41l2-202ENSMUST00000092645 4280 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
PrkdcP97313 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
PrkdcP97313 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PrkdcP97313 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 Gm24113-201ENSMUST00000157477 276 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC3.93□□□□□ -1.78
PrkdcP97313 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PrkdcP97313 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
PrkdcP97313 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC3.93□□□□□ -1.78
PrkdcP97313 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC3.93□□□□□ -1.78
PrkdcP97313 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
PrkdcP97313 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
PrkdcP97313 Sptan1-205ENSMUST00000113719 8018 ntTSL 5 BASIC3.93□□□□□ -1.78
PrkdcP97313 Cacna1c-208ENSMUST00000187317 6663 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
PrkdcP97313 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PrkdcP97313 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PrkdcP97313 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PrkdcP97313 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
PrkdcP97313 Sorbs1-211ENSMUST00000224667 4313 ntAPPRIS ALT2 BASIC3.93□□□□□ -1.78
PrkdcP97313 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
PrkdcP97313 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC3.93□□□□□ -1.78
PrkdcP97313 Gm5252-201ENSMUST00000189030 909 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 Gm5735-201ENSMUST00000207053 167 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 AC153961.1-201ENSMUST00000217760 385 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 Gm7045-201ENSMUST00000221466 605 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
PrkdcP97313 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
PrkdcP97313 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
PrkdcP97313 AC152944.1-201ENSMUST00000220160 3101 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PrkdcP97313 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PrkdcP97313 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PrkdcP97313 Gm45117-201ENSMUST00000207250 1774 ntBASIC3.93□□□□□ -1.78
PrkdcP97313 AC116726.1-201ENSMUST00000215028 3497 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms