Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdh11P55288 Gm26289-201ENSMUST00000104169 131 ntBASIC5.52□□□□□ -1.53
Cdh11P55288 Gm25415-201ENSMUST00000104220 132 ntBASIC5.52□□□□□ -1.53
Cdh11P55288 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Cdh11P55288 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Cdh11P55288 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdh11P55288 Gm15421-202ENSMUST00000118224 399 ntBASIC5.52□□□□□ -1.53
Cdh11P55288 Gm12262-201ENSMUST00000119915 305 ntBASIC5.52□□□□□ -1.53
Cdh11P55288 Gm14998-201ENSMUST00000120502 495 ntBASIC5.52□□□□□ -1.53
Cdh11P55288 Gm7212-201ENSMUST00000120817 348 ntBASIC5.52□□□□□ -1.53
Cdh11P55288 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC5.52□□□□□ -1.53
Cdh11P55288 Gm25219-201ENSMUST00000157545 330 ntBASIC5.52□□□□□ -1.53
Cdh11P55288 Gm26162-201ENSMUST00000157793 132 ntBASIC5.52□□□□□ -1.53
Cdh11P55288 Gm23894-201ENSMUST00000158107 313 ntBASIC5.52□□□□□ -1.53
Cdh11P55288 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cdh11P55288 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Cdh11P55288 Gm22548-201ENSMUST00000174899 78 ntBASIC5.52□□□□□ -1.53
Cdh11P55288 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC5.52□□□□□ -1.53
Cdh11P55288 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC5.52□□□□□ -1.53
Cdh11P55288 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Cdh11P55288 Gm27005-201ENSMUST00000182783 921 ntBASIC5.52□□□□□ -1.53
Cdh11P55288 Gm27602-201ENSMUST00000183861 111 ntBASIC5.52□□□□□ -1.53
Cdh11P55288 Mir3473e-201ENSMUST00000183932 110 ntBASIC5.52□□□□□ -1.53
Cdh11P55288 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
Cdh11P55288 Gm27160-201ENSMUST00000184837 199 ntBASIC5.52□□□□□ -1.53
Cdh11P55288 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC5.52□□□□□ -1.53
Cdh11P55288 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC5.52□□□□□ -1.53
Cdh11P55288 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC5.52□□□□□ -1.53
Cdh11P55288 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC5.52□□□□□ -1.53
Cdh11P55288 Scgb2b33-201ENSMUST00000187413 334 ntBASIC5.52□□□□□ -1.53
Cdh11P55288 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC5.52□□□□□ -1.53
Cdh11P55288 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC5.52□□□□□ -1.53
Cdh11P55288 Gm37135-201ENSMUST00000192652 534 ntBASIC5.52□□□□□ -1.53
Cdh11P55288 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC5.52□□□□□ -1.53
Cdh11P55288 Gm43744-201ENSMUST00000196387 688 ntBASIC5.52□□□□□ -1.53
Cdh11P55288 Gm43233-201ENSMUST00000200491 616 ntBASIC5.52□□□□□ -1.53
Cdh11P55288 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC5.52□□□□□ -1.53
Cdh11P55288 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC5.52□□□□□ -1.53
Cdh11P55288 AC142113.2-201ENSMUST00000217425 748 ntBASIC5.52□□□□□ -1.53
Cdh11P55288 Gm9535-201ENSMUST00000218499 768 ntBASIC5.52□□□□□ -1.53
Cdh11P55288 AC152169.2-201ENSMUST00000224558 613 ntBASIC5.52□□□□□ -1.53
Cdh11P55288 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.52□□□□□ -1.53
Cdh11P55288 AC122290.1-201ENSMUST00000225631 1078 ntBASIC5.52□□□□□ -1.53
Cdh11P55288 AC164597.1-201ENSMUST00000226538 514 ntBASIC5.52□□□□□ -1.53
Cdh11P55288 AC113031.1-201ENSMUST00000227400 432 ntBASIC5.52□□□□□ -1.53
Cdh11P55288 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdh11P55288 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdh11P55288 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Cdh11P55288 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdh11P55288 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC5.52□□□□□ -1.53
Cdh11P55288 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdh11P55288 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cdh11P55288 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdh11P55288 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdh11P55288 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC5.52□□□□□ -1.53
Cdh11P55288 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cdh11P55288 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Cdh11P55288 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Cdh11P55288 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Cdh11P55288 Gm19093-201ENSMUST00000210671 1454 ntBASIC5.51□□□□□ -1.53
Cdh11P55288 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Cdh11P55288 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdh11P55288 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Cdh11P55288 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
Cdh11P55288 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdh11P55288 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdh11P55288 Gm7155-201ENSMUST00000121143 1671 ntBASIC5.51□□□□□ -1.53
Cdh11P55288 Gm37894-201ENSMUST00000195416 2599 ntBASIC5.51□□□□□ -1.53
Cdh11P55288 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdh11P55288 Gm24989-201ENSMUST00000104461 88 ntBASIC5.51□□□□□ -1.53
Cdh11P55288 Snora35-201ENSMUST00000104579 128 ntBASIC5.51□□□□□ -1.53
Cdh11P55288 Gm13193-201ENSMUST00000117275 225 ntBASIC5.51□□□□□ -1.53
Cdh11P55288 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC5.51□□□□□ -1.53
Cdh11P55288 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdh11P55288 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdh11P55288 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdh11P55288 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC5.51□□□□□ -1.53
Cdh11P55288 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdh11P55288 Gm6542-201ENSMUST00000153606 772 ntBASIC5.51□□□□□ -1.53
Cdh11P55288 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC5.51□□□□□ -1.53
Cdh11P55288 Mir1960-201ENSMUST00000157488 78 ntBASIC5.51□□□□□ -1.53
Cdh11P55288 Gm23553-201ENSMUST00000157817 295 ntBASIC5.51□□□□□ -1.53
Cdh11P55288 Gm25374-201ENSMUST00000158158 101 ntBASIC5.51□□□□□ -1.53
Cdh11P55288 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Cdh11P55288 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC5.51□□□□□ -1.53
Cdh11P55288 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC5.51□□□□□ -1.53
Cdh11P55288 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC5.51□□□□□ -1.53
Cdh11P55288 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Cdh11P55288 Gm27853-201ENSMUST00000184176 250 ntBASIC5.51□□□□□ -1.53
Cdh11P55288 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC5.51□□□□□ -1.53
Cdh11P55288 Gm5066-201ENSMUST00000188479 822 ntBASIC5.51□□□□□ -1.53
Cdh11P55288 Gm28996-201ENSMUST00000190316 721 ntBASIC5.51□□□□□ -1.53
Cdh11P55288 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdh11P55288 Gm37770-201ENSMUST00000192855 772 ntBASIC5.51□□□□□ -1.53
Cdh11P55288 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC5.51□□□□□ -1.53
Cdh11P55288 Gm37475-201ENSMUST00000193107 1015 ntBASIC5.51□□□□□ -1.53
Cdh11P55288 Gm18985-201ENSMUST00000196472 1079 ntBASIC5.51□□□□□ -1.53
Cdh11P55288 Gm2602-201ENSMUST00000202112 571 ntBASIC5.51□□□□□ -1.53
Cdh11P55288 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC5.51□□□□□ -1.53
Cdh11P55288 Gm44690-201ENSMUST00000207984 382 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms