Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cux1P53564 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
Cux1P53564 Gm14382-201ENSMUST00000117374 437 ntBASIC9.1□□□□□ -0.95
Cux1P53564 Gm11894-201ENSMUST00000121579 328 ntBASIC9.1□□□□□ -0.95
Cux1P53564 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC9.1□□□□□ -0.95
Cux1P53564 Mir6343-201ENSMUST00000183584 84 ntBASIC9.1□□□□□ -0.95
Cux1P53564 Gm28353-201ENSMUST00000186482 570 ntBASIC9.1□□□□□ -0.95
Cux1P53564 Gm28533-201ENSMUST00000186741 570 ntBASIC9.1□□□□□ -0.95
Cux1P53564 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC9.1□□□□□ -0.95
Cux1P53564 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cux1P53564 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cux1P53564 AC151971.3-201ENSMUST00000214694 404 ntBASIC9.1□□□□□ -0.95
Cux1P53564 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC9.1□□□□□ -0.95
Cux1P53564 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cux1P53564 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cux1P53564 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cux1P53564 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Cux1P53564 AC174797.5-201ENSMUST00000225055 1860 ntBASIC9.1□□□□□ -0.95
Cux1P53564 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cux1P53564 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cux1P53564 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Cux1P53564 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cux1P53564 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Cux1P53564 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC9.1□□□□□ -0.95
Cux1P53564 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cux1P53564 Gm14601-201ENSMUST00000120892 236 ntBASIC9.1□□□□□ -0.95
Cux1P53564 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cux1P53564 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC9.1□□□□□ -0.95
Cux1P53564 Gm24295-201ENSMUST00000158298 131 ntBASIC9.1□□□□□ -0.95
Cux1P53564 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cux1P53564 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cux1P53564 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC9.1□□□□□ -0.95
Cux1P53564 Gm36378-201ENSMUST00000201709 388 ntBASIC9.1□□□□□ -0.95
Cux1P53564 Gm44225-201ENSMUST00000203582 186 ntBASIC9.1□□□□□ -0.95
Cux1P53564 Gm45690-201ENSMUST00000210775 246 ntBASIC9.1□□□□□ -0.95
Cux1P53564 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC9.1□□□□□ -0.95
Cux1P53564 Gm10709-201ENSMUST00000213318 480 ntBASIC9.1□□□□□ -0.95
Cux1P53564 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cux1P53564 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC9.09□□□□□ -0.95
Cux1P53564 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Cux1P53564 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Cux1P53564 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cux1P53564 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cux1P53564 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cux1P53564 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cux1P53564 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Cux1P53564 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.95
Cux1P53564 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Cux1P53564 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cux1P53564 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC9.09□□□□□ -0.95
Cux1P53564 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cux1P53564 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cux1P53564 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Cux1P53564 Gm38224-201ENSMUST00000191648 2100 ntBASIC9.09□□□□□ -0.95
Cux1P53564 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cux1P53564 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC9.09□□□□□ -0.95
Cux1P53564 Gm23954-201ENSMUST00000157213 353 ntBASIC9.09□□□□□ -0.95
Cux1P53564 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Cux1P53564 Mir5103-201ENSMUST00000175111 79 ntBASIC9.09□□□□□ -0.95
Cux1P53564 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cux1P53564 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC9.09□□□□□ -0.95
Cux1P53564 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC9.09□□□□□ -0.95
Cux1P53564 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cux1P53564 Gm42646-201ENSMUST00000202233 914 ntBASIC9.09□□□□□ -0.95
Cux1P53564 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Cux1P53564 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC9.09□□□□□ -0.95
Cux1P53564 Gm3257-201ENSMUST00000207217 675 ntBASIC9.09□□□□□ -0.95
Cux1P53564 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC9.09□□□□□ -0.95
Cux1P53564 AC154436.2-201ENSMUST00000227408 208 ntBASIC9.09□□□□□ -0.95
Cux1P53564 Gm7887-201ENSMUST00000056948 537 ntBASIC9.09□□□□□ -0.95
Cux1P53564 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cux1P53564 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cux1P53564 Gm45413-201ENSMUST00000210389 3538 ntBASIC9.09□□□□□ -0.95
Cux1P53564 AC105407.2-205ENSMUST00000224680 2733 ntBASIC9.09□□□□□ -0.95
Cux1P53564 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC9.09□□□□□ -0.95
Cux1P53564 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
Cux1P53564 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cux1P53564 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Cux1P53564 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Cux1P53564 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC9.08□□□□□ -0.96
Cux1P53564 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cux1P53564 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Cux1P53564 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cux1P53564 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cux1P53564 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cux1P53564 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cux1P53564 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Cux1P53564 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC9.08□□□□□ -0.96
Cux1P53564 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC9.08□□□□□ -0.96
Cux1P53564 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cux1P53564 Gm25758-201ENSMUST00000103987 129 ntBASIC9.08□□□□□ -0.96
Cux1P53564 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC9.08□□□□□ -0.96
Cux1P53564 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC9.08□□□□□ -0.96
Cux1P53564 Gm17511-201ENSMUST00000172206 342 ntBASIC9.08□□□□□ -0.96
Cux1P53564 Mir6417-201ENSMUST00000183815 116 ntBASIC9.08□□□□□ -0.96
Cux1P53564 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC9.08□□□□□ -0.96
Cux1P53564 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC9.08□□□□□ -0.96
Cux1P53564 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
Cux1P53564 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Cux1P53564 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 115.4 ms