Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Shmt1P50431 AC151904.1-201ENSMUST00000219945 1498 ntBASIC6.66□□□□□ -1.34
Shmt1P50431 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Shmt1P50431 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Shmt1P50431 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Shmt1P50431 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.66□□□□□ -1.34
Shmt1P50431 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Shmt1P50431 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.66□□□□□ -1.34
Shmt1P50431 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Shmt1P50431 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC6.66□□□□□ -1.34
Shmt1P50431 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Shmt1P50431 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Shmt1P50431 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Shmt1P50431 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Shmt1P50431 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Shmt1P50431 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Shmt1P50431 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Shmt1P50431 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC6.66□□□□□ -1.34
Shmt1P50431 Gm12643-201ENSMUST00000116078 374 ntBASIC6.66□□□□□ -1.34
Shmt1P50431 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Shmt1P50431 Gm6446-201ENSMUST00000120604 818 ntBASIC6.66□□□□□ -1.34
Shmt1P50431 Gm13578-201ENSMUST00000120849 590 ntBASIC6.66□□□□□ -1.34
Shmt1P50431 Gm12890-201ENSMUST00000120885 373 ntBASIC6.66□□□□□ -1.34
Shmt1P50431 Gm26346-201ENSMUST00000157525 329 ntBASIC6.66□□□□□ -1.34
Shmt1P50431 Gm24369-201ENSMUST00000175387 96 ntBASIC6.66□□□□□ -1.34
Shmt1P50431 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC6.66□□□□□ -1.34
Shmt1P50431 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Shmt1P50431 Gm2539-203ENSMUST00000181352 746 ntBASIC6.66□□□□□ -1.34
Shmt1P50431 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Shmt1P50431 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Shmt1P50431 Gm18952-201ENSMUST00000194471 846 ntBASIC6.66□□□□□ -1.34
Shmt1P50431 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC6.66□□□□□ -1.34
Shmt1P50431 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC6.66□□□□□ -1.34
Shmt1P50431 Gm44865-201ENSMUST00000207240 531 ntBASIC6.66□□□□□ -1.34
Shmt1P50431 Gm44809-201ENSMUST00000208305 993 ntBASIC6.66□□□□□ -1.34
Shmt1P50431 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC6.66□□□□□ -1.34
Shmt1P50431 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC6.66□□□□□ -1.34
Shmt1P50431 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.66□□□□□ -1.34
Shmt1P50431 AC155941.3-201ENSMUST00000218476 308 ntBASIC6.66□□□□□ -1.34
Shmt1P50431 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC6.66□□□□□ -1.34
Shmt1P50431 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Shmt1P50431 Gm7557-201ENSMUST00000221935 865 ntBASIC6.66□□□□□ -1.34
Shmt1P50431 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.66□□□□□ -1.34
Shmt1P50431 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Shmt1P50431 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Shmt1P50431 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Shmt1P50431 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Shmt1P50431 Gm23238-201ENSMUST00000083007 164 ntBASIC6.66□□□□□ -1.34
Shmt1P50431 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.66□□□□□ -1.34
Shmt1P50431 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Shmt1P50431 Wnk1-218ENSMUST00000161512 1426 ntBASIC6.66□□□□□ -1.34
Shmt1P50431 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Shmt1P50431 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Shmt1P50431 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Shmt1P50431 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Shmt1P50431 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Shmt1P50431 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Shmt1P50431 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Shmt1P50431 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Shmt1P50431 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Shmt1P50431 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Shmt1P50431 Gm43707-201ENSMUST00000196451 3187 ntBASIC6.65□□□□□ -1.34
Shmt1P50431 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC6.65□□□□□ -1.34
Shmt1P50431 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Shmt1P50431 Gm6494-201ENSMUST00000218604 2298 ntBASIC6.65□□□□□ -1.34
Shmt1P50431 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Shmt1P50431 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.65□□□□□ -1.34
Shmt1P50431 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Shmt1P50431 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Shmt1P50431 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.65□□□□□ -1.34
Shmt1P50431 Gm11821-201ENSMUST00000117335 979 ntBASIC6.65□□□□□ -1.34
Shmt1P50431 Gm14755-201ENSMUST00000118037 384 ntBASIC6.65□□□□□ -1.34
Shmt1P50431 Gm12518-201ENSMUST00000122075 779 ntBASIC6.65□□□□□ -1.34
Shmt1P50431 Gm26069-201ENSMUST00000157497 277 ntBASIC6.65□□□□□ -1.34
Shmt1P50431 Gm22518-201ENSMUST00000158267 68 ntBASIC6.65□□□□□ -1.34
Shmt1P50431 Gm15795-201ENSMUST00000160969 553 ntBASIC6.65□□□□□ -1.34
Shmt1P50431 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC6.65□□□□□ -1.34
Shmt1P50431 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC6.65□□□□□ -1.34
Shmt1P50431 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.65□□□□□ -1.34
Shmt1P50431 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC6.65□□□□□ -1.34
Shmt1P50431 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC6.65□□□□□ -1.34
Shmt1P50431 Gm23450-201ENSMUST00000178285 91 ntBASIC6.65□□□□□ -1.34
Shmt1P50431 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Shmt1P50431 Gm38333-201ENSMUST00000193608 604 ntBASIC6.65□□□□□ -1.34
Shmt1P50431 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC6.65□□□□□ -1.34
Shmt1P50431 Trbv9-201ENSMUST00000194494 290 ntBASIC6.65□□□□□ -1.34
Shmt1P50431 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC6.65□□□□□ -1.34
Shmt1P50431 Igkv12-67-201ENSMUST00000197806 354 ntBASIC6.65□□□□□ -1.34
Shmt1P50431 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.65□□□□□ -1.34
Shmt1P50431 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC6.65□□□□□ -1.34
Shmt1P50431 AC165292.1-201ENSMUST00000215218 620 ntBASIC6.65□□□□□ -1.34
Shmt1P50431 AC166574.3-201ENSMUST00000226725 367 ntBASIC6.65□□□□□ -1.34
Shmt1P50431 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.65□□□□□ -1.34
Shmt1P50431 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Shmt1P50431 Vmn2r125-201ENSMUST00000096794 1110 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Shmt1P50431 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC6.65□□□□□ -1.34
Shmt1P50431 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Shmt1P50431 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Shmt1P50431 Gm44068-201ENSMUST00000204049 2128 ntBASIC6.65□□□□□ -1.35
Shmt1P50431 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms