Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC7.96□□□□□ -1.14
Rfx1P48377 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC7.96□□□□□ -1.14
Rfx1P48377 AC131654.1-201ENSMUST00000219675 745 ntBASIC7.96□□□□□ -1.14
Rfx1P48377 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC7.96□□□□□ -1.14
Rfx1P48377 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC7.96□□□□□ -1.14
Rfx1P48377 AC160114.1-201ENSMUST00000221930 365 ntBASIC7.96□□□□□ -1.14
Rfx1P48377 CT954323.2-201ENSMUST00000222056 213 ntBASIC7.96□□□□□ -1.14
Rfx1P48377 AC139568.1-201ENSMUST00000222878 486 ntBASIC7.96□□□□□ -1.14
Rfx1P48377 AC157650.2-201ENSMUST00000224666 328 ntBASIC7.96□□□□□ -1.14
Rfx1P48377 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Rfx1P48377 AC139569.1-201ENSMUST00000226080 614 ntBASIC7.96□□□□□ -1.14
Rfx1P48377 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Rfx1P48377 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Rfx1P48377 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC7.96□□□□□ -1.14
Rfx1P48377 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Rfx1P48377 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
Rfx1P48377 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC7.96□□□□□ -1.14
Rfx1P48377 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Rfx1P48377 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Rfx1P48377 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Rfx1P48377 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
Rfx1P48377 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Rfx1P48377 Gm37940-201ENSMUST00000194243 3251 ntBASIC7.96□□□□□ -1.14
Rfx1P48377 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Rfx1P48377 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC7.96□□□□□ -1.14
Rfx1P48377 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Rfx1P48377 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Rfx1P48377 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Rfx1P48377 Gm44739-201ENSMUST00000205294 1426 ntBASIC7.95□□□□□ -1.14
Rfx1P48377 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Rfx1P48377 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Rfx1P48377 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Rfx1P48377 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Rfx1P48377 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Rfx1P48377 Gm14797-201ENSMUST00000119378 1480 ntBASIC7.95□□□□□ -1.14
Rfx1P48377 Gm42540-201ENSMUST00000200319 2008 ntBASIC7.95□□□□□ -1.14
Rfx1P48377 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Rfx1P48377 Gm42763-201ENSMUST00000199595 2087 ntBASIC7.95□□□□□ -1.14
Rfx1P48377 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC7.95□□□□□ -1.14
Rfx1P48377 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Rfx1P48377 Gm24986-201ENSMUST00000104452 132 ntBASIC7.95□□□□□ -1.14
Rfx1P48377 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Rfx1P48377 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Rfx1P48377 Gm14229-201ENSMUST00000121178 850 ntBASIC7.95□□□□□ -1.14
Rfx1P48377 Gm16373-201ENSMUST00000129517 303 ntBASIC7.95□□□□□ -1.14
Rfx1P48377 Gm16138-201ENSMUST00000159341 821 ntBASIC7.95□□□□□ -1.14
Rfx1P48377 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC7.95□□□□□ -1.14
Rfx1P48377 Gm20430-201ENSMUST00000172474 207 ntBASIC7.95□□□□□ -1.14
Rfx1P48377 Gm3585-201ENSMUST00000173438 875 ntBASIC7.95□□□□□ -1.14
Rfx1P48377 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC7.95□□□□□ -1.14
Rfx1P48377 Gm27001-201ENSMUST00000182252 936 ntBASIC7.95□□□□□ -1.14
Rfx1P48377 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC7.95□□□□□ -1.14
Rfx1P48377 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC7.95□□□□□ -1.14
Rfx1P48377 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC7.95□□□□□ -1.14
Rfx1P48377 Ighv1-38-201ENSMUST00000192755 349 ntBASIC7.95□□□□□ -1.14
Rfx1P48377 Gm36965-201ENSMUST00000193797 394 ntBASIC7.95□□□□□ -1.14
Rfx1P48377 Gm2142-201ENSMUST00000197899 589 ntBASIC7.95□□□□□ -1.14
Rfx1P48377 Klra13-ps-203ENSMUST00000204367 850 ntBASIC7.95□□□□□ -1.14
Rfx1P48377 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC7.95□□□□□ -1.14
Rfx1P48377 Gm44861-201ENSMUST00000208325 1220 ntBASIC7.95□□□□□ -1.14
Rfx1P48377 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC7.95□□□□□ -1.14
Rfx1P48377 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Rfx1P48377 Olfr809-203ENSMUST00000218237 1100 ntBASIC7.95□□□□□ -1.14
Rfx1P48377 AC121844.1-201ENSMUST00000218706 137 ntBASIC7.95□□□□□ -1.14
Rfx1P48377 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC7.95□□□□□ -1.14
Rfx1P48377 AC163621.2-201ENSMUST00000222229 682 ntBASIC7.95□□□□□ -1.14
Rfx1P48377 AC154510.1-201ENSMUST00000223925 737 ntBASIC7.95□□□□□ -1.14
Rfx1P48377 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC7.95□□□□□ -1.14
Rfx1P48377 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Rfx1P48377 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Rfx1P48377 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Rfx1P48377 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Rfx1P48377 Mir16-2-201ENSMUST00000083672 95 ntBASIC7.95□□□□□ -1.14
Rfx1P48377 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Rfx1P48377 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Rfx1P48377 Gm44288-201ENSMUST00000205061 2795 ntBASIC7.95□□□□□ -1.14
Rfx1P48377 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Rfx1P48377 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Rfx1P48377 Gm37598-201ENSMUST00000194506 1301 ntBASIC7.95□□□□□ -1.14
Rfx1P48377 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC7.95□□□□□ -1.14
Rfx1P48377 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Rfx1P48377 CT010577.1-202ENSMUST00000226187 1903 ntBASIC7.95□□□□□ -1.14
Rfx1P48377 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Rfx1P48377 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC7.95□□□□□ -1.14
Rfx1P48377 Gm21122-201ENSMUST00000191548 3452 ntBASIC7.95□□□□□ -1.14
Rfx1P48377 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Rfx1P48377 AC130217.2-201ENSMUST00000224009 2990 ntBASIC7.95□□□□□ -1.14
Rfx1P48377 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Rfx1P48377 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Rfx1P48377 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Rfx1P48377 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Rfx1P48377 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC7.94□□□□□ -1.14
Rfx1P48377 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Rfx1P48377 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Rfx1P48377 Gm38156-201ENSMUST00000194601 2260 ntBASIC7.94□□□□□ -1.14
Rfx1P48377 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Rfx1P48377 Gm22774-201ENSMUST00000102084 109 ntBASIC7.94□□□□□ -1.14
Rfx1P48377 Gm25498-201ENSMUST00000104424 129 ntBASIC7.94□□□□□ -1.14
Rfx1P48377 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC7.94□□□□□ -1.14
Rfx1P48377 Gm12225-201ENSMUST00000117995 298 ntBASIC7.94□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms