Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
HttP42859 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
HttP42859 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HttP42859 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
HttP42859 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HttP42859 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
HttP42859 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HttP42859 Gm23534-201ENSMUST00000157539 97 ntBASIC6.06□□□□□ -1.44
HttP42859 Zakit-201ENSMUST00000157677 308 ntBASIC6.06□□□□□ -1.44
HttP42859 Gm24188-201ENSMUST00000157980 108 ntBASIC6.06□□□□□ -1.44
HttP42859 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
HttP42859 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
HttP42859 Mir7222-201ENSMUST00000183740 75 ntBASIC6.06□□□□□ -1.44
HttP42859 AC152394.2-202ENSMUST00000228503 1064 ntBASIC6.06□□□□□ -1.44
HttP42859 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC6.06□□□□□ -1.44
HttP42859 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HttP42859 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HttP42859 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC6.06□□□□□ -1.44
HttP42859 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HttP42859 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HttP42859 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC6.06□□□□□ -1.44
HttP42859 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
HttP42859 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
HttP42859 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HttP42859 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HttP42859 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HttP42859 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.06□□□□□ -1.44
HttP42859 Gm42540-201ENSMUST00000200319 2008 ntBASIC6.05□□□□□ -1.44
HttP42859 Gm12466-201ENSMUST00000121199 620 ntBASIC6.05□□□□□ -1.44
HttP42859 Gm22411-201ENSMUST00000175462 126 ntBASIC6.05□□□□□ -1.44
HttP42859 Gm22002-201ENSMUST00000175622 125 ntBASIC6.05□□□□□ -1.44
HttP42859 Gm18717-201ENSMUST00000192744 1241 ntBASIC6.05□□□□□ -1.44
HttP42859 Gm2429-201ENSMUST00000194635 586 ntBASIC6.05□□□□□ -1.44
HttP42859 Gm45610-201ENSMUST00000209227 784 ntBASIC6.05□□□□□ -1.44
HttP42859 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HttP42859 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC6.05□□□□□ -1.44
HttP42859 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HttP42859 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HttP42859 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HttP42859 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HttP42859 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HttP42859 Rapgef6-203ENSMUST00000102743 8189 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
HttP42859 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
HttP42859 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HttP42859 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HttP42859 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HttP42859 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HttP42859 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
HttP42859 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
HttP42859 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
HttP42859 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.05□□□□□ -1.44
HttP42859 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HttP42859 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HttP42859 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HttP42859 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HttP42859 Gm25865-201ENSMUST00000158247 104 ntBASIC6.05□□□□□ -1.44
HttP42859 Gm24767-201ENSMUST00000158509 95 ntBASIC6.05□□□□□ -1.44
HttP42859 Vmn2r-ps72-201ENSMUST00000172586 907 ntBASIC6.05□□□□□ -1.44
HttP42859 Gm36986-201ENSMUST00000195320 353 ntBASIC6.05□□□□□ -1.44
HttP42859 Gm8458-201ENSMUST00000196658 819 ntBASIC6.05□□□□□ -1.44
HttP42859 CT025689.2-201ENSMUST00000224979 429 ntBASIC6.05□□□□□ -1.44
HttP42859 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
HttP42859 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HttP42859 Dclk1-203ENSMUST00000167204 6025 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HttP42859 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HttP42859 Gm18632-201ENSMUST00000222597 2087 ntBASIC6.05□□□□□ -1.44
HttP42859 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
HttP42859 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
HttP42859 Gm29293-201ENSMUST00000189416 2188 ntBASIC6.05□□□□□ -1.44
HttP42859 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
HttP42859 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HttP42859 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
HttP42859 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
HttP42859 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
HttP42859 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC6.05□□□□□ -1.44
HttP42859 Gm28503-201ENSMUST00000185966 147 ntBASIC6.05□□□□□ -1.44
HttP42859 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC6.05□□□□□ -1.44
HttP42859 Gm45525-201ENSMUST00000210800 389 ntBASIC6.05□□□□□ -1.44
HttP42859 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC6.05□□□□□ -1.44
HttP42859 Gm6906-201ENSMUST00000218014 569 ntBASIC6.05□□□□□ -1.44
HttP42859 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HttP42859 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
HttP42859 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HttP42859 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HttP42859 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HttP42859 Sec24c-202ENSMUST00000223751 4196 ntBASIC6.04□□□□□ -1.44
HttP42859 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
HttP42859 Isy1-201ENSMUST00000089497 5837 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HttP42859 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HttP42859 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HttP42859 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HttP42859 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.04□□□□□ -1.44
HttP42859 Gm12110-201ENSMUST00000121601 579 ntBASIC6.04□□□□□ -1.44
HttP42859 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC6.04□□□□□ -1.44
HttP42859 Gm27754-201ENSMUST00000183340 126 ntBASIC6.04□□□□□ -1.44
HttP42859 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC6.04□□□□□ -1.44
HttP42859 Gm44757-201ENSMUST00000206373 157 ntBASIC6.04□□□□□ -1.44
HttP42859 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HttP42859 Gm7128-201ENSMUST00000211639 533 ntBASIC6.04□□□□□ -1.44
HttP42859 Prl7a1-203ENSMUST00000224852 1283 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms