Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cxcl12P40224 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cxcl12P40224 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Cxcl12P40224 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Cxcl12P40224 Gm37107-201ENSMUST00000195326 2552 ntBASIC6.23□□□□□ -1.41
Cxcl12P40224 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cxcl12P40224 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cxcl12P40224 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Cxcl12P40224 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cxcl12P40224 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Cxcl12P40224 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Cxcl12P40224 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Cxcl12P40224 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Cxcl12P40224 Gm14510-201ENSMUST00000116165 1092 ntBASIC6.23□□□□□ -1.41
Cxcl12P40224 Gm12040-201ENSMUST00000118357 537 ntBASIC6.23□□□□□ -1.41
Cxcl12P40224 Gm12074-201ENSMUST00000120189 219 ntBASIC6.23□□□□□ -1.41
Cxcl12P40224 Gm12181-201ENSMUST00000121448 531 ntBASIC6.23□□□□□ -1.41
Cxcl12P40224 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC6.23□□□□□ -1.41
Cxcl12P40224 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.23□□□□□ -1.41
Cxcl12P40224 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cxcl12P40224 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cxcl12P40224 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cxcl12P40224 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cxcl12P40224 Gm22993-201ENSMUST00000175423 254 ntBASIC6.23□□□□□ -1.41
Cxcl12P40224 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC6.23□□□□□ -1.41
Cxcl12P40224 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cxcl12P40224 Gm28976-201ENSMUST00000188070 144 ntBASIC6.23□□□□□ -1.41
Cxcl12P40224 Gm29551-201ENSMUST00000190913 698 ntBASIC6.23□□□□□ -1.41
Cxcl12P40224 Gm37511-201ENSMUST00000192901 294 ntBASIC6.23□□□□□ -1.41
Cxcl12P40224 Gm2287-202ENSMUST00000199619 1000 ntBASIC6.23□□□□□ -1.41
Cxcl12P40224 Gm43631-201ENSMUST00000202011 369 ntBASIC6.23□□□□□ -1.41
Cxcl12P40224 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC6.23□□□□□ -1.41
Cxcl12P40224 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC6.23□□□□□ -1.41
Cxcl12P40224 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Cxcl12P40224 AC164302.1-201ENSMUST00000227036 433 ntBASIC6.23□□□□□ -1.41
Cxcl12P40224 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cxcl12P40224 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Cxcl12P40224 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Cxcl12P40224 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cxcl12P40224 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Cxcl12P40224 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cxcl12P40224 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Cxcl12P40224 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cxcl12P40224 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cxcl12P40224 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cxcl12P40224 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC6.23□□□□□ -1.41
Cxcl12P40224 Gm43606-201ENSMUST00000195938 3556 ntBASIC6.23□□□□□ -1.41
Cxcl12P40224 Gm1966-201ENSMUST00000184540 7293 ntBASIC6.23□□□□□ -1.41
Cxcl12P40224 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Cxcl12P40224 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cxcl12P40224 Gm44102-201ENSMUST00000204031 1666 ntBASIC6.23□□□□□ -1.41
Cxcl12P40224 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cxcl12P40224 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cxcl12P40224 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cxcl12P40224 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Cxcl12P40224 Gm42885-201ENSMUST00000200763 4214 ntBASIC6.23□□□□□ -1.41
Cxcl12P40224 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Cxcl12P40224 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
Cxcl12P40224 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cxcl12P40224 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
Cxcl12P40224 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Cxcl12P40224 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cxcl12P40224 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Cxcl12P40224 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Cxcl12P40224 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.22□□□□□ -1.41
Cxcl12P40224 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cxcl12P40224 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cxcl12P40224 Gm43728-201ENSMUST00000198817 2622 ntBASIC6.22□□□□□ -1.41
Cxcl12P40224 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.22□□□□□ -1.41
Cxcl12P40224 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cxcl12P40224 Gm9877-201ENSMUST00000064271 2627 ntBASIC6.22□□□□□ -1.41
Cxcl12P40224 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cxcl12P40224 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cxcl12P40224 AC158115.1-201ENSMUST00000222830 3182 ntBASIC6.22□□□□□ -1.41
Cxcl12P40224 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Cxcl12P40224 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cxcl12P40224 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Cxcl12P40224 Gm16089-201ENSMUST00000117679 336 ntBASIC6.22□□□□□ -1.41
Cxcl12P40224 Gm4989-201ENSMUST00000118711 749 ntBASIC6.22□□□□□ -1.41
Cxcl12P40224 Gm14746-201ENSMUST00000120309 741 ntBASIC6.22□□□□□ -1.41
Cxcl12P40224 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cxcl12P40224 Gm25534-201ENSMUST00000175365 125 ntBASIC6.22□□□□□ -1.41
Cxcl12P40224 Gm26318-201ENSMUST00000176507 96 ntBASIC6.22□□□□□ -1.41
Cxcl12P40224 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
Cxcl12P40224 Mir6337-201ENSMUST00000184194 105 ntBASIC6.22□□□□□ -1.41
Cxcl12P40224 Mir6926-201ENSMUST00000184562 68 ntBASIC6.22□□□□□ -1.41
Cxcl12P40224 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC6.22□□□□□ -1.41
Cxcl12P40224 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Cxcl12P40224 Gm36999-201ENSMUST00000192756 1046 ntBASIC6.22□□□□□ -1.41
Cxcl12P40224 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC6.22□□□□□ -1.41
Cxcl12P40224 Gm35648-201ENSMUST00000202304 475 ntBASIC6.22□□□□□ -1.41
Cxcl12P40224 Gm44604-201ENSMUST00000205475 496 ntBASIC6.22□□□□□ -1.41
Cxcl12P40224 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC6.22□□□□□ -1.41
Cxcl12P40224 Gm17766-201ENSMUST00000209223 442 ntBASIC6.22□□□□□ -1.41
Cxcl12P40224 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC6.22□□□□□ -1.41
Cxcl12P40224 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC6.22□□□□□ -1.41
Cxcl12P40224 n-R5s180-201ENSMUST00000082770 106 ntBASIC6.22□□□□□ -1.41
Cxcl12P40224 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cxcl12P40224 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cxcl12P40224 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms