Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Traf1P39428 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Traf1P39428 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Traf1P39428 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Traf1P39428 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC7.09□□□□□ -1.27
Traf1P39428 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Traf1P39428 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Traf1P39428 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Traf1P39428 Gm12193-201ENSMUST00000117250 379 ntBASIC7.09□□□□□ -1.27
Traf1P39428 Gm14925-201ENSMUST00000120611 438 ntBASIC7.09□□□□□ -1.27
Traf1P39428 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Traf1P39428 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC7.09□□□□□ -1.27
Traf1P39428 Gm3650-201ENSMUST00000180600 747 ntBASIC7.09□□□□□ -1.27
Traf1P39428 Gm2539-203ENSMUST00000181352 746 ntBASIC7.09□□□□□ -1.27
Traf1P39428 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC7.09□□□□□ -1.27
Traf1P39428 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC7.09□□□□□ -1.27
Traf1P39428 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Traf1P39428 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC7.09□□□□□ -1.27
Traf1P39428 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC7.09□□□□□ -1.27
Traf1P39428 AC119894.1-201ENSMUST00000220399 350 ntBASIC7.09□□□□□ -1.27
Traf1P39428 AC166574.3-201ENSMUST00000226725 367 ntBASIC7.09□□□□□ -1.27
Traf1P39428 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC7.09□□□□□ -1.27
Traf1P39428 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Traf1P39428 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Traf1P39428 Gm1966-201ENSMUST00000184540 7293 ntBASIC7.09□□□□□ -1.27
Traf1P39428 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Traf1P39428 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC7.09□□□□□ -1.27
Traf1P39428 Gm37332-201ENSMUST00000195853 2844 ntBASIC7.09□□□□□ -1.28
Traf1P39428 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Traf1P39428 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC7.08□□□□□ -1.28
Traf1P39428 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Traf1P39428 Gm44209-201ENSMUST00000204556 4153 ntBASIC7.08□□□□□ -1.28
Traf1P39428 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Traf1P39428 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Traf1P39428 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Traf1P39428 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Traf1P39428 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Traf1P39428 Gm13428-201ENSMUST00000117540 365 ntBASIC7.08□□□□□ -1.28
Traf1P39428 Gm14529-201ENSMUST00000117894 406 ntBASIC7.08□□□□□ -1.28
Traf1P39428 Gm16074-201ENSMUST00000119524 444 ntBASIC7.08□□□□□ -1.28
Traf1P39428 Gm14294-201ENSMUST00000119749 751 ntBASIC7.08□□□□□ -1.28
Traf1P39428 Gm12654-201ENSMUST00000120387 587 ntBASIC7.08□□□□□ -1.28
Traf1P39428 Gm11848-201ENSMUST00000121207 973 ntBASIC7.08□□□□□ -1.28
Traf1P39428 Gm12094-201ENSMUST00000121781 472 ntBASIC7.08□□□□□ -1.28
Traf1P39428 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC7.08□□□□□ -1.28
Traf1P39428 Gm24767-201ENSMUST00000158509 95 ntBASIC7.08□□□□□ -1.28
Traf1P39428 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Traf1P39428 Gm3715-201ENSMUST00000172308 617 ntBASIC7.08□□□□□ -1.28
Traf1P39428 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC7.08□□□□□ -1.28
Traf1P39428 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Traf1P39428 Gm6055-201ENSMUST00000180532 378 ntBASIC7.08□□□□□ -1.28
Traf1P39428 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC7.08□□□□□ -1.28
Traf1P39428 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC7.08□□□□□ -1.28
Traf1P39428 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC7.08□□□□□ -1.28
Traf1P39428 Gm28080-201ENSMUST00000188552 722 ntBASIC7.08□□□□□ -1.28
Traf1P39428 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Traf1P39428 Gm21524-201ENSMUST00000190499 696 ntBASIC7.08□□□□□ -1.28
Traf1P39428 Gm21715-201ENSMUST00000191056 694 ntBASIC7.08□□□□□ -1.28
Traf1P39428 Gm37784-201ENSMUST00000193233 189 ntBASIC7.08□□□□□ -1.28
Traf1P39428 Gm38291-201ENSMUST00000193671 259 ntBASIC7.08□□□□□ -1.28
Traf1P39428 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC7.08□□□□□ -1.28
Traf1P39428 AC157822.1-201ENSMUST00000196643 80 ntBASIC7.08□□□□□ -1.28
Traf1P39428 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC7.08□□□□□ -1.28
Traf1P39428 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Traf1P39428 Gm5306-201ENSMUST00000203325 757 ntBASIC7.08□□□□□ -1.28
Traf1P39428 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC7.08□□□□□ -1.28
Traf1P39428 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC7.08□□□□□ -1.28
Traf1P39428 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC7.08□□□□□ -1.28
Traf1P39428 AC163743.1-201ENSMUST00000224309 270 ntBASIC7.08□□□□□ -1.28
Traf1P39428 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC7.08□□□□□ -1.28
Traf1P39428 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Traf1P39428 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC7.08□□□□□ -1.28
Traf1P39428 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Traf1P39428 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Traf1P39428 Gm19093-201ENSMUST00000210671 1454 ntBASIC7.08□□□□□ -1.28
Traf1P39428 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Traf1P39428 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Traf1P39428 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Traf1P39428 Gm45424-201ENSMUST00000210575 3300 ntBASIC7.08□□□□□ -1.28
Traf1P39428 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Traf1P39428 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Traf1P39428 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Traf1P39428 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Traf1P39428 Gm38377-201ENSMUST00000193253 3772 ntBASIC7.08□□□□□ -1.28
Traf1P39428 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Traf1P39428 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Traf1P39428 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Traf1P39428 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Traf1P39428 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Traf1P39428 Gm37127-201ENSMUST00000192924 3036 ntBASIC7.07□□□□□ -1.28
Traf1P39428 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Traf1P39428 Gm37056-201ENSMUST00000192141 1865 ntBASIC7.07□□□□□ -1.28
Traf1P39428 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Traf1P39428 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Traf1P39428 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Traf1P39428 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Traf1P39428 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Traf1P39428 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Traf1P39428 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Traf1P39428 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms