Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc5P32043 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc5P32043 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc5P32043 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc5P32043 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Hoxc5P32043 Gm13770-201ENSMUST00000117149 305 ntBASIC5.42□□□□□ -1.54
Hoxc5P32043 Gm6744-201ENSMUST00000119303 543 ntBASIC5.42□□□□□ -1.54
Hoxc5P32043 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc5P32043 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC5.42□□□□□ -1.54
Hoxc5P32043 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc5P32043 Gm22428-201ENSMUST00000158554 132 ntBASIC5.42□□□□□ -1.54
Hoxc5P32043 Gm8550-201ENSMUST00000161621 653 ntBASIC5.42□□□□□ -1.54
Hoxc5P32043 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC5.42□□□□□ -1.54
Hoxc5P32043 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc5P32043 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC5.42□□□□□ -1.54
Hoxc5P32043 Gm5694-201ENSMUST00000195648 641 ntBASIC5.42□□□□□ -1.54
Hoxc5P32043 Gm42640-201ENSMUST00000199792 1195 ntBASIC5.42□□□□□ -1.54
Hoxc5P32043 Gm44374-201ENSMUST00000199821 140 ntBASIC5.42□□□□□ -1.54
Hoxc5P32043 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC5.42□□□□□ -1.54
Hoxc5P32043 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC5.42□□□□□ -1.54
Hoxc5P32043 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC5.42□□□□□ -1.54
Hoxc5P32043 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC5.42□□□□□ -1.54
Hoxc5P32043 AC140930.1-201ENSMUST00000221889 389 ntBASIC5.42□□□□□ -1.54
Hoxc5P32043 Gm8256-203ENSMUST00000228692 591 ntBASIC5.42□□□□□ -1.54
Hoxc5P32043 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc5P32043 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Hoxc5P32043 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc5P32043 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc5P32043 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc5P32043 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc5P32043 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc5P32043 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc5P32043 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc5P32043 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Hoxc5P32043 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Hoxc5P32043 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxc5P32043 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxc5P32043 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.41□□□□□ -1.54
Hoxc5P32043 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
Hoxc5P32043 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxc5P32043 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC5.41□□□□□ -1.54
Hoxc5P32043 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxc5P32043 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxc5P32043 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxc5P32043 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.41□□□□□ -1.54
Hoxc5P32043 Mir449c-201ENSMUST00000102192 109 ntBASIC5.41□□□□□ -1.54
Hoxc5P32043 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Hoxc5P32043 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxc5P32043 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Hoxc5P32043 Gm13768-201ENSMUST00000116469 929 ntBASIC5.41□□□□□ -1.54
Hoxc5P32043 Gm11609-201ENSMUST00000121926 793 ntBASIC5.41□□□□□ -1.54
Hoxc5P32043 Gm25782-201ENSMUST00000122526 289 ntBASIC5.41□□□□□ -1.54
Hoxc5P32043 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxc5P32043 Gm16164-201ENSMUST00000160078 468 ntBASIC5.41□□□□□ -1.54
Hoxc5P32043 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Hoxc5P32043 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Hoxc5P32043 Gm29124-201ENSMUST00000186576 452 ntBASIC5.41□□□□□ -1.54
Hoxc5P32043 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC5.41□□□□□ -1.54
Hoxc5P32043 Gm28066-201ENSMUST00000188657 472 ntBASIC5.41□□□□□ -1.54
Hoxc5P32043 Gm38177-201ENSMUST00000192213 1040 ntBASIC5.41□□□□□ -1.54
Hoxc5P32043 Gm18427-201ENSMUST00000195422 515 ntBASIC5.41□□□□□ -1.54
Hoxc5P32043 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC5.41□□□□□ -1.54
Hoxc5P32043 Gm43467-201ENSMUST00000197441 437 ntBASIC5.41□□□□□ -1.54
Hoxc5P32043 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.41□□□□□ -1.54
Hoxc5P32043 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC5.41□□□□□ -1.54
Hoxc5P32043 Gm45724-201ENSMUST00000213031 420 ntBASIC5.41□□□□□ -1.54
Hoxc5P32043 AC165292.1-201ENSMUST00000215218 620 ntBASIC5.41□□□□□ -1.54
Hoxc5P32043 Gm7570-201ENSMUST00000215246 698 ntBASIC5.41□□□□□ -1.54
Hoxc5P32043 AC165260.3-201ENSMUST00000225101 665 ntBASIC5.41□□□□□ -1.54
Hoxc5P32043 AC154634.2-201ENSMUST00000225983 1184 ntBASIC5.41□□□□□ -1.54
Hoxc5P32043 AC163664.2-201ENSMUST00000228894 459 ntBASIC5.41□□□□□ -1.54
Hoxc5P32043 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxc5P32043 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Hoxc5P32043 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Hoxc5P32043 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.41□□□□□ -1.54
Hoxc5P32043 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Hoxc5P32043 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.41□□□□□ -1.54
Hoxc5P32043 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Hoxc5P32043 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Hoxc5P32043 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.4□□□□□ -1.54
Hoxc5P32043 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Hoxc5P32043 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Hoxc5P32043 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Hoxc5P32043 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Hoxc5P32043 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Hoxc5P32043 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.54
Hoxc5P32043 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Hoxc5P32043 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Hoxc5P32043 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Hoxc5P32043 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Hoxc5P32043 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Hoxc5P32043 Gm25345-201ENSMUST00000104505 133 ntBASIC5.4□□□□□ -1.54
Hoxc5P32043 n-R5s172-201ENSMUST00000104508 114 ntBASIC5.4□□□□□ -1.54
Hoxc5P32043 Gm13114-201ENSMUST00000117605 106 ntBASIC5.4□□□□□ -1.54
Hoxc5P32043 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC5.4□□□□□ -1.54
Hoxc5P32043 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC5.4□□□□□ -1.54
Hoxc5P32043 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC5.4□□□□□ -1.54
Hoxc5P32043 Gm13531-201ENSMUST00000121893 543 ntBASIC5.4□□□□□ -1.54
Hoxc5P32043 Gm15237-201ENSMUST00000122104 469 ntBASIC5.4□□□□□ -1.54
Hoxc5P32043 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms