Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col2a1P28481 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col2a1P28481 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col2a1P28481 Ighv3-2-201ENSMUST00000191842 349 ntBASIC6.73□□□□□ -1.33
Col2a1P28481 Gm37308-201ENSMUST00000194684 100 ntBASIC6.73□□□□□ -1.33
Col2a1P28481 Gm42646-201ENSMUST00000202233 914 ntBASIC6.73□□□□□ -1.33
Col2a1P28481 Gm45249-201ENSMUST00000211021 348 ntBASIC6.73□□□□□ -1.33
Col2a1P28481 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC6.73□□□□□ -1.33
Col2a1P28481 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col2a1P28481 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.73□□□□□ -1.33
Col2a1P28481 Gm4012-201ENSMUST00000221504 581 ntBASIC6.73□□□□□ -1.33
Col2a1P28481 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC6.73□□□□□ -1.33
Col2a1P28481 AC152394.2-202ENSMUST00000228503 1064 ntBASIC6.73□□□□□ -1.33
Col2a1P28481 Mir134-201ENSMUST00000083492 71 ntBASIC6.73□□□□□ -1.33
Col2a1P28481 Gm10743-201ENSMUST00000219611 2358 ntBASIC6.73□□□□□ -1.33
Col2a1P28481 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Col2a1P28481 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Col2a1P28481 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col2a1P28481 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Col2a1P28481 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Col2a1P28481 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Col2a1P28481 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Col2a1P28481 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Col2a1P28481 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col2a1P28481 AC022682.2-202ENSMUST00000224394 3943 ntBASIC6.73□□□□□ -1.33
Col2a1P28481 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col2a1P28481 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col2a1P28481 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col2a1P28481 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Col2a1P28481 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col2a1P28481 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC6.73□□□□□ -1.33
Col2a1P28481 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col2a1P28481 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Col2a1P28481 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Col2a1P28481 Gm12654-201ENSMUST00000120387 587 ntBASIC6.73□□□□□ -1.33
Col2a1P28481 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col2a1P28481 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col2a1P28481 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC6.73□□□□□ -1.33
Col2a1P28481 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col2a1P28481 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col2a1P28481 Gm20453-201ENSMUST00000173968 226 ntBASIC6.73□□□□□ -1.33
Col2a1P28481 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC6.73□□□□□ -1.33
Col2a1P28481 Ighv5-19-201ENSMUST00000193466 297 ntBASIC6.73□□□□□ -1.33
Col2a1P28481 AC154583.1-201ENSMUST00000224788 655 ntBASIC6.73□□□□□ -1.33
Col2a1P28481 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.73□□□□□ -1.33
Col2a1P28481 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.73□□□□□ -1.33
Col2a1P28481 Rybp-ps-201ENSMUST00000069489 681 ntBASIC6.73□□□□□ -1.33
Col2a1P28481 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Col2a1P28481 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Col2a1P28481 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col2a1P28481 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col2a1P28481 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col2a1P28481 AC112142.1-203ENSMUST00000228670 2472 ntBASIC6.72□□□□□ -1.33
Col2a1P28481 Gm45633-201ENSMUST00000210669 3253 ntBASIC6.72□□□□□ -1.33
Col2a1P28481 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.72□□□□□ -1.33
Col2a1P28481 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Col2a1P28481 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col2a1P28481 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC6.72□□□□□ -1.33
Col2a1P28481 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col2a1P28481 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col2a1P28481 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Col2a1P28481 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col2a1P28481 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col2a1P28481 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Col2a1P28481 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Col2a1P28481 Gm42940-201ENSMUST00000200361 2362 ntBASIC6.72□□□□□ -1.33
Col2a1P28481 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col2a1P28481 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Col2a1P28481 Gm43745-201ENSMUST00000198085 1883 ntBASIC6.72□□□□□ -1.33
Col2a1P28481 Gm37216-201ENSMUST00000193817 3478 ntBASIC6.72□□□□□ -1.33
Col2a1P28481 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Col2a1P28481 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC6.72□□□□□ -1.33
Col2a1P28481 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col2a1P28481 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col2a1P28481 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col2a1P28481 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col2a1P28481 Gm15073-201ENSMUST00000117432 634 ntBASIC6.72□□□□□ -1.33
Col2a1P28481 Gm20397-201ENSMUST00000174520 362 ntBASIC6.72□□□□□ -1.33
Col2a1P28481 Gm22650-201ENSMUST00000175138 105 ntBASIC6.72□□□□□ -1.33
Col2a1P28481 Mir3090-201ENSMUST00000175597 87 ntBASIC6.72□□□□□ -1.33
Col2a1P28481 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC6.72□□□□□ -1.33
Col2a1P28481 Gm18969-201ENSMUST00000189423 730 ntBASIC6.72□□□□□ -1.33
Col2a1P28481 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC6.72□□□□□ -1.33
Col2a1P28481 Gm38015-201ENSMUST00000193048 188 ntBASIC6.72□□□□□ -1.33
Col2a1P28481 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC6.72□□□□□ -1.33
Col2a1P28481 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC6.72□□□□□ -1.33
Col2a1P28481 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC6.72□□□□□ -1.33
Col2a1P28481 Gm6702-201ENSMUST00000208496 471 ntBASIC6.72□□□□□ -1.33
Col2a1P28481 Gm4032-201ENSMUST00000210886 487 ntBASIC6.72□□□□□ -1.33
Col2a1P28481 Gm20786-201ENSMUST00000212649 436 ntBASIC6.72□□□□□ -1.33
Col2a1P28481 Gm10709-201ENSMUST00000213318 480 ntBASIC6.72□□□□□ -1.33
Col2a1P28481 Gm8290-201ENSMUST00000218202 477 ntBASIC6.72□□□□□ -1.33
Col2a1P28481 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.72□□□□□ -1.33
Col2a1P28481 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Col2a1P28481 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Col2a1P28481 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Col2a1P28481 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Col2a1P28481 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Col2a1P28481 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.72□□□□□ -1.33
Col2a1P28481 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms