Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.31□□□□□ -1.56
P20040 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
P20040 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
P20040 AC158595.1-201ENSMUST00000217989 1435 ntBASIC5.31□□□□□ -1.56
P20040 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.31□□□□□ -1.56
P20040 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
P20040 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
P20040 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
P20040 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
P20040 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
P20040 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
P20040 Gm45413-201ENSMUST00000210389 3538 ntBASIC5.3□□□□□ -1.56
P20040 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
P20040 Gm44045-201ENSMUST00000204906 2520 ntBASIC5.3□□□□□ -1.56
P20040 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
P20040 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
P20040 Gm37703-201ENSMUST00000192292 1784 ntBASIC5.3□□□□□ -1.56
P20040 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.3□□□□□ -1.56
P20040 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
P20040 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
P20040 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
P20040 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
P20040 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
P20040 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
P20040 Gm25795-201ENSMUST00000104421 132 ntBASIC5.3□□□□□ -1.56
P20040 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
P20040 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
P20040 Gm22952-201ENSMUST00000116720 120 ntBASIC5.3□□□□□ -1.56
P20040 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC5.3□□□□□ -1.56
P20040 Gm14173-201ENSMUST00000117690 278 ntBASIC5.3□□□□□ -1.56
P20040 Gm15366-201ENSMUST00000118433 1019 ntBASIC5.3□□□□□ -1.56
P20040 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC5.3□□□□□ -1.56
P20040 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC5.3□□□□□ -1.56
P20040 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
P20040 Gm23553-201ENSMUST00000157817 295 ntBASIC5.3□□□□□ -1.56
P20040 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
P20040 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC5.3□□□□□ -1.56
P20040 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
P20040 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
P20040 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
P20040 Mir6244-201ENSMUST00000184156 117 ntBASIC5.3□□□□□ -1.56
P20040 Gm29385-201ENSMUST00000186831 363 ntBASIC5.3□□□□□ -1.56
P20040 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC5.3□□□□□ -1.56
P20040 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
P20040 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
P20040 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC5.3□□□□□ -1.56
P20040 AC134917.2-201ENSMUST00000223354 124 ntBASIC5.3□□□□□ -1.56
P20040 AC131187.2-201ENSMUST00000223936 994 ntBASIC5.3□□□□□ -1.56
P20040 AC154718.1-201ENSMUST00000226676 250 ntBASIC5.3□□□□□ -1.56
P20040 AC154484.2-201ENSMUST00000228359 818 ntBASIC5.3□□□□□ -1.56
P20040 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
P20040 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
P20040 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
P20040 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
P20040 Gm43981-201ENSMUST00000203285 1467 ntBASIC5.3□□□□□ -1.56
P20040 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC5.3□□□□□ -1.56
P20040 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC5.3□□□□□ -1.56
P20040 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
P20040 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
P20040 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
P20040 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC5.3□□□□□ -1.56
P20040 Gm46199-201ENSMUST00000220373 1693 ntBASIC5.3□□□□□ -1.56
P20040 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
P20040 Gm43025-201ENSMUST00000201764 1886 ntBASIC5.3□□□□□ -1.56
P20040 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
P20040 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.3□□□□□ -1.56
P20040 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
P20040 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC5.3□□□□□ -1.56
P20040 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.3□□□□□ -1.56
P20040 Gm44220-201ENSMUST00000203784 2487 ntBASIC5.3□□□□□ -1.56
P20040 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
P20040 Gm42503-201ENSMUST00000199080 3706 ntBASIC5.3□□□□□ -1.56
P20040 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
P20040 AC123629.1-201ENSMUST00000225669 1364 ntBASIC5.29□□□□□ -1.56
P20040 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
P20040 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
P20040 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.29□□□□□ -1.56
P20040 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
P20040 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.29□□□□□ -1.56
P20040 AC154612.1-202ENSMUST00000224806 1725 ntBASIC5.29□□□□□ -1.56
P20040 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
P20040 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
P20040 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
P20040 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
P20040 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
P20040 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
P20040 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
P20040 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
P20040 Gm12677-201ENSMUST00000118668 426 ntBASIC5.29□□□□□ -1.56
P20040 Gm15618-201ENSMUST00000121610 452 ntBASIC5.29□□□□□ -1.56
P20040 Gm25387-201ENSMUST00000157813 132 ntBASIC5.29□□□□□ -1.56
P20040 Gm23386-201ENSMUST00000158585 144 ntBASIC5.29□□□□□ -1.56
P20040 Gm15740-201ENSMUST00000159703 1292 ntBASIC5.29□□□□□ -1.56
P20040 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC5.29□□□□□ -1.56
P20040 Gm26238-201ENSMUST00000175538 117 ntBASIC5.29□□□□□ -1.56
P20040 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
P20040 Gm27037-201ENSMUST00000182270 960 ntBASIC5.29□□□□□ -1.56
P20040 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC5.29□□□□□ -1.56
P20040 Gm3351-201ENSMUST00000193454 505 ntBASIC5.29□□□□□ -1.56
P20040 Ighv1-14-201ENSMUST00000194015 402 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 111.1 ms